RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 FBP1P09467 338 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 HKR1P10072 659 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TBPP20226 339 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 RBP2P50120 134 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 RPS4XP62701 263 aaKnown RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SRPXP78539 464 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C17orf67Q0P5P2 114 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF141Q15928 474 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TMEM41BQ5BJD5 291 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 PABPC1L2AQ5JQF8 200 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ACER2Q5QJU3 275 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 NCR3LG1Q68D85 454 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR10J5Q8NHC4 309 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MITD1Q8WV92 249 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 HGDQ93099 445 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MRPL24Q96A35 216 aaKnown RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SHARPINQ9H0F6 387 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SH3BGRL3Q9H299 93 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MOB1AQ9H8S9 216 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 GCM1Q9NP62 436 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 PISDQ9UG56 409 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 LAMP3Q9UQV4 416 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TRAPPC1Q9Y5R8 145 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 KCNMB2Q9Y691 235 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SBF1O95248 1867 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C3orf85A0A1B0GTC6 90 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 RBFOX3A6NFN3 312 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ANKUB1A6NFN9 424 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 FTCDNL1E5RQL4 147 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 PIN1P1O15428 100 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ANGPTL7O43827 346 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SCRG1O75711 98 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MDKP21741 143 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 GPM6AP51674 278 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF154Q13106 437 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 PMS2P11Q13670 270 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ETV3LQ6ZN32 361 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF808Q8N4W9 903 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ZNRF4Q8WWF5 429 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ASB16Q96NS5 453 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 GDE1Q9NZC3 331 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR2M5A3KFT3 312 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 CDRT15L2A8MXV6 281 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 HSBP1L1C9JCN9 74 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MT-CO2P00403 227 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MT-ND4LP03901 98 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 GSTP1P09211 210 aaKnown RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR5H8P0DN80 308 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 FOLR3P41439 243 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SLC37A1P57057 533 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF816Q0VGE8 651 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SKP2Q13309 424 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C5orf46Q6UWT4 87 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SLC36A1Q7Z2H8 476 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 BHLHE23Q8NDY6 225 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR13G1Q8NGZ3 307 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR8U1Q8NH10 309 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 KISS1RQ969F8 398 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TAAR9Q96RI9 348 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 HDHD3Q9BSH5 251 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C8orf33Q9H7E9 229 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 UCK1Q9HA47 277 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 CALHM2Q9HA72 323 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ZNF275Q9NSD4 429 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MMACHCQ9Y4U1 282 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 A0A087X0M5 115 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TRAV14DV4A0A0A6YYC5 116 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 A0A1B0GX30 115 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C7orf77A4D0Y5 90 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 H3BP45 60 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TCAPO15273 167 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TMEM127O75204 238 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 BGLAPP02818 100 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SLC25A6P12236 298 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 BCKDHBP21953 392 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 PNLIPRP2P54317 469 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 ERVK-16P61578 105 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 HBG1P69891 147 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 HBG2P69892 147 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 H3F3AP84243 136 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SPANXN5Q5MJ07 72 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C1QL3Q5VWW1 255 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 WDR5BQ86VZ2 330 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR8B12Q8NGG6 310 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 OR4A16Q8NH70 328 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 SPPL3Q8TCT6 385 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 MARVELD3Q96A59 401 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 C8orf44Q96CB5 159 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 CABLES2Q9BTV7 478 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 REG4Q9BYZ8 158 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TMEM74BQ9NUR3 256 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 NUP205Q92621 2012 aa4.44□□□□□ -1.7
SYNE2-223ENST00000557005 TMEM229AB2RXF0 380 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 MFNGO00587 321 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 OLFM2O95897 454 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 CTLA4P16410 223 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 KLK2P20151 261 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 DRD1P21728 446 aa4.43□□□□□ -1.7
SYNE2-223ENST00000557005 ACAA2P42765 397 aaKnown RBP4.43□□□□□ -1.7
SYNE2-223ENST00000557005 GFERP55789 205 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms