RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ANKRD61A6NGH8 418 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 LRRC30A6NM36 301 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 ZNF732B4DXR9 585 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 RGS10O43665 173 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 IRF2P14316 349 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 FOSL1P15407 271 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CDH15P55291 814 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 BTG1P62324 171 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 TMEM249Q2WGJ8 235 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CEACAM21Q3KPI0 293 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CCDC58Q4VC31 144 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 RBM48Q5RL73 367 aaKnown RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 PEG10Q86TG7 708 aaKnown RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 C11orf53Q8IXP5 236 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 BOLLQ8N9W6 283 aaKnown RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 C19orf18Q8NEA5 215 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CCDC54Q8NEL0 328 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 OR13C3Q8NGS6 347 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CLDND2Q8NHS1 167 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 RPS4Y2Q8TD47 263 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 NPRL2Q8WTW4 380 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 RGP1Q92546 391 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 RPL3LQ92901 407 aaKnown RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 HPS1Q92902 700 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 ERGIC1Q969X5 290 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 FGGYQ96C11 551 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 ADAT3Q96EY9 351 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CDCA4Q9BXL8 241 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 CCDC90BQ9GZT6 254 aa14.71□□□□□ -0.05
SHMT2-225ENST00000556798 METTL17Q9H7H0 456 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-225ENST00000556798 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.71□□□□□ -0.052e-7■■■■□ 19.7
SHMT2-225ENST00000556798 TMEM210A6NLX4 147 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 IFNL4K9M1U5 179 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 OGG1O15527 345 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 IGHV2-70P01814 119 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF12P17014 697 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF20P17024 532 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 KRTAP1-1Q07627 177 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 IRF3Q14653 427 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 ZMYND11Q15326 602 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF181Q2M3W8 571 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 RNLSQ5VYX0 342 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 TRMT10AQ8TBZ6 339 aaKnown RBP14.7□□□□□ -0.06
SHMT2-225ENST00000556798 TSEN15Q8WW01 171 aaKnown RBP14.7□□□□□ -0.06
SHMT2-225ENST00000556798 SMIM19Q96E16 107 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 GAL3ST1Q99999 423 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 MND1Q9BWT6 205 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 CHST5Q9GZS9 411 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 RASSF4Q9H2L5 321 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 RNF7Q9UBF6 113 aa14.7□□□□□ -0.06
SHMT2-225ENST00000556798 OR5B21A6NL26 309 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 CDIPTO14735 213 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 LY6G6DO95868 133 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 EGR1P18146 543 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 EEF1B2P24534 225 aaKnown RBP14.69□□□□□ -0.06
SHMT2-225ENST00000556798 CD80P33681 288 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 GNG3P63215 75 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 UBE2V2Q15819 145 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 DMKNQ6E0U4 476 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-225ENST00000556798 WDR82Q6UXN9 313 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 C1orf87Q8N0U7 546 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 SCCPDHQ8NBX0 429 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 OR5A2Q8NGI9 324 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 OR13C5Q8NGS8 318 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 LRRC29Q8WV35 223 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 OR5M11Q96RB7 305 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 TLNRD1Q9H1K6 362 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 BLOC1S6Q9UL45 172 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 LSM2Q9Y333 95 aaKnown RBP14.69□□□□□ -0.06
SHMT2-225ENST00000556798 DOCK11Q5JSL3 2073 aa14.69□□□□□ -0.06
SHMT2-225ENST00000556798 C3orf80F5H4A9 247 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 IGHV4-31P0DP07 118 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 MAP2K4P45985 399 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 SOX2P48431 317 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 SFRP4Q6FHJ7 346 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-225ENST00000556798 Q71RC1 249 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-225ENST00000556798 BIVMQ86UB2 503 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 LURAP1LQ8IV03 231 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 GCSAMQ8N6F7 178 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 C10orf35Q96D05 121 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 PGLYRP3Q96LB9 341 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 OR51I2Q9H344 312 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 DHDHQ9UQ10 334 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 ARHGAP32A7KAX9 2087 aa14.68□□□□□ -0.06
SHMT2-225ENST00000556798 PPIAL4EA0A075B759 164 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 FAM230AA0A1W2PPH8 454 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 PQLC2LA1A4F0 135 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 PPIAL4DF5H284 164 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 RHBDL1O75783 438 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 GATBO75879 557 aaKnown RBP14.67□□□□□ -0.06
SHMT2-225ENST00000556798 PPIAL4FP0DN26 164 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 ZNF16P17020 682 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-225ENST00000556798 CELP19835 753 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 MDH2P40926 338 aaKnown RBP14.67□□□□□ -0.06
SHMT2-225ENST00000556798 TAS2R43P59537 309 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 GMFBP60983 142 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 MED22Q15528 200 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 FAM76BQ5HYJ3 339 aa14.67□□□□□ -0.06
SHMT2-225ENST00000556798 HAGHLQ6PII5 290 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-225ENST00000556798 CLEC9AQ6UXN8 241 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms