RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ARMCX4Q5H9R4 360 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 SLC25A30Q5SVS4 291 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4L9Q6RFH8 374 aaPredicted RBP17.04■□□□□ 0.32
VTI1B-205ENST00000555543 ZBTB49Q6ZSB9 765 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 THAP5Q7Z6K1 395 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 RORBQ92753 470 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 NUDT16L1Q9BRJ7 211 aaKnown RBP17.04■□□□□ 0.32
VTI1B-205ENST00000555543 WDR13Q9H1Z4 485 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 DUX4Q9UBX2 424 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.04■□□□□ 0.32
VTI1B-205ENST00000555543 GMPPBQ9Y5P6 360 aa17.04■□□□□ 0.32
VTI1B-205ENST00000555543 KIR2DS1A0A191URI9 304 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 METTL15A6NJ78 407 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 NDUFA2O43678 99 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 GABRB1P18505 474 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 GMFBP60983 142 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ISL1P61371 349 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 OCLNQ16625 522 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ODF4Q2M2E3 257 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 CEACAM21Q3KPI0 293 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 WDR38Q5JTN6 314 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ZBTB37Q5TC79 503 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 BTNL3Q6UXE8 466 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 CATSPERDQ86XM0 798 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 FGFRL1Q8N441 504 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 RNF166Q96A37 237 aaPredicted RBP17.03■□□□□ 0.32
VTI1B-205ENST00000555543 RNFT2Q96EX2 444 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ACOXLQ9NUZ1 547 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ERVK-18Q9QC07 812 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ENPP5Q9UJA9 477 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 V9GYS6 101 aa17.03■□□□□ 0.32
VTI1B-205ENST00000555543 ZNF732B4DXR9 585 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 J3QRE1 110 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 AKR7A2O43488 359 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 RHBDL1O75783 438 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 SULT1C4O75897 302 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 BAG2O95816 211 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 MUC1P15941 1255 aaPredicted RBP17.02■□□□□ 0.32
VTI1B-205ENST00000555543 NPY4RP50391 375 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 MICBQ29980 383 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 TP53I3Q53FA7 332 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 PLCXD3Q63HM9 321 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 Q6ZSR3 168 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 MOB3CQ70IA8 216 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 ENTHD1Q8IYW4 607 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 OR10Z1Q8NGY1 313 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 OR14K1Q8NGZ2 314 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 ZNF418Q8TF45 676 aaPredicted RBP17.02■□□□□ 0.32
VTI1B-205ENST00000555543 ITFG2Q969R8 447 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 HIST1H2AAQ96QV6 131 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 CCL13Q99616 98 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 OR51I2Q9H344 312 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 KAAG1Q9UBP8 84 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 ZNF69Q9UC07 566 aa17.02■□□□□ 0.32
VTI1B-205ENST00000555543 A0A0A6YYJ9 748 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 A6NIN4 97 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 H3BSH0 61 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 TMPRSS2O15393 492 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 MTRF1O75570 445 aaKnown RBP17.01■□□□□ 0.31
VTI1B-205ENST00000555543 TFF1P04155 84 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 IGHV4-38-2P0DP08 117 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 AMY2BP19961 511 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 CCL1P22362 96 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 HILS1P60008 231 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 GNG3P63215 75 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 MEDAGQ5VYS4 303 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 TMEM42Q69YG0 159 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 STUMQ69YW2 141 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 PRSS35Q8N3Z0 413 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 BPIFB2Q8N4F0 458 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 FAM216BQ8N7L0 139 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 STMN2Q93045 179 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 UPRTQ96BW1 309 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 GPR173Q9NS66 373 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 SNTG1Q9NSN8 517 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 GNG8Q9UK08 70 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 NUP50Q9UKX7 468 aa17.01■□□□□ 0.31
VTI1B-205ENST00000555543 IGHV3OR16-10A0A075B7F0 116 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 OR5B21A6NL26 309 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 DLGAP1O14490 977 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 DVL1O14640 695 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 ENSAO43768 121 aaKnown RBP17■□□□□ 0.31
VTI1B-205ENST00000555543 NRASP01111 189 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 KIR3DL2P43630 455 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 FGF12P61328 243 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 ZNF91Q05481 1191 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 TUSC1Q2TAM9 212 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 USP43Q70EL4 1123 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 DOK3Q7L591 496 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 OR5T2Q8NGG2 359 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 OR5A2Q8NGI9 324 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 C12orf43Q96C57 262 aaKnown RBP17■□□□□ 0.31
VTI1B-205ENST00000555543 FAM118AQ9NWS6 357 aa17■□□□□ 0.31
VTI1B-205ENST00000555543 PPIAL4GP0DN37 164 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 SELLP14151 372 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 CDONQ4KMG0 1287 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 CLVS2Q5SYC1 327 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 HAGHLQ6PII5 290 aaPredicted RBP16.99■□□□□ 0.31
VTI1B-205ENST00000555543 FAM220AQ7Z4H9 259 aa16.99■□□□□ 0.31
VTI1B-205ENST00000555543 BCL6BQ8N143 479 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms