RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TGIF1Q15583 401 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 CCDC28AQ8IWP9 274 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 ZDHHC22Q8N966 263 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 MDS2Q8NDY4 140 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 CPEB3Q8NE35 698 aaKnown RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 STEAP2Q8NFT2 490 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 FNDC9Q8TBE3 224 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 ELL3Q9HB65 397 aaPredicted RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 B3GNT2Q9NY97 397 aa21.13■□□□□ 0.97
TMEM260-207ENST00000555497 ZNF230Q9UIE0 474 aaPredicted RBP21.13■□□□□ 0.97
TMEM260-207ENST00000555497 DHRS7CA6NNS2 312 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 HLA-AP01891 365 aaKnown RBP21.12■□□□□ 0.97
TMEM260-207ENST00000555497 SP1P08047 785 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 MTCP1P56278 107 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 PLGLB1Q02325 96 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 RIPPLY1Q0D2K3 151 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 PPP1R1AQ13522 171 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 C3AR1Q16581 482 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 C9orf135Q5VTT2 229 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 OR8H3Q8N146 312 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 TM2D1Q9BX74 207 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 CLEC4MQ9H2X3 399 aaPredicted RBP21.12■□□□□ 0.97
TMEM260-207ENST00000555497 M0R233 179 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 NOS1APO75052 506 aaPredicted RBP21.12■□□□□ 0.97
TMEM260-207ENST00000555497 IFNA6P05013 189 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 MEOX1P50221 254 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 PCBD1P61457 104 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 SEC61A1P61619 476 aaKnown RBP21.12■□□□□ 0.97
TMEM260-207ENST00000555497 ZNF92Q03936 586 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 ARFRP1Q13795 201 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 PABPC1L2AQ5JQF8 200 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 PECRQ9BY49 303 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 CALHM2Q9HA72 323 aa21.12■□□□□ 0.97
TMEM260-207ENST00000555497 L7N2F9 121 aa21.11■□□□□ 0.97
TMEM260-207ENST00000555497 ZNHIT1O43257 154 aa21.11■□□□□ 0.97
TMEM260-207ENST00000555497 ARF1P84077 181 aaKnown RBP21.11■□□□□ 0.97
TMEM260-207ENST00000555497 FAM189A2Q15884 450 aa21.11■□□□□ 0.97
TMEM260-207ENST00000555497 SUMF1Q8NBK3 374 aa21.11■□□□□ 0.97
TMEM260-207ENST00000555497 ST8SIA4Q92187 359 aa21.11■□□□□ 0.97
TMEM260-207ENST00000555497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.11■□□□□ 0.97
TMEM260-207ENST00000555497 FAM230AA0A1W2PPH8 454 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 ARPC5O15511 151 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 ANGPTL7O43827 346 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 NME2P1O60361 137 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 NME2P22392 152 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 ESCO2Q56NI9 601 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 LYG2Q86SG7 212 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 HOGA1Q86XE5 327 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 MARCH1Q8TCQ1 289 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 PCNPQ8WW12 178 aaKnown RBP21.1■□□□□ 0.97
TMEM260-207ENST00000555497 FER1L6-AS2Q96M78 137 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 IP6K3Q96PC2 410 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 FXYD6-FXYD2A0A087WZ82 144 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 ZNF587BE7ETH6 402 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 RGS11O94810 467 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 TMEM225BP0DP42 221 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 CD34P28906 385 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 FAM3AP98173 230 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 SORDQ00796 357 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 LIN54Q6MZP7 749 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 MAFIPQ8WZ33 124 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 S100A13Q99584 98 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 ST6GALNAC5Q9BVH7 336 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 LINC00470Q9BZP3 86 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 FXYD6Q9H0Q3 95 aa21.1■□□□□ 0.97
TMEM260-207ENST00000555497 NOP16Q9Y3C1 178 aaKnown RBP21.1■□□□□ 0.97
TMEM260-207ENST00000555497 C9orf170A2RU37 121 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 HMSDA8MTL9 139 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 EFSO43281 561 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 SPRY1O43609 319 aaPredicted RBP21.09■□□□□ 0.97
TMEM260-207ENST00000555497 IL2RAP01589 272 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 EDN3P14138 238 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 TMEM42Q69YG0 159 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 FAM117AQ9C073 453 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 LIPGQ9Y5X9 500 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 A0A096LPE4 126 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 TRAV14DV4A0A0A6YYC5 116 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 hCG_38984A0A1B0GV85 526 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 A0A1W2PPZ6 126 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 CCSO14618 274 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 SYNGR4O95473 234 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 PPP3CBP16298 524 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 VAX1Q5SQQ9 334 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 SPSB1Q96BD6 273 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 ZNF581Q9P0T4 197 aa21.09■□□□□ 0.97
TMEM260-207ENST00000555497 ZSCAN5BA6NJL1 495 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 LEUTXA8MZ59 168 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 PLATP00750 562 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 PPIAP62937 165 aaKnown RBP21.08■□□□□ 0.97
TMEM260-207ENST00000555497 IKZF1Q13422 519 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 CLVS2Q5SYC1 327 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 PIP4P1Q86T03 277 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 TERB2Q8NHR7 220 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 DHRS9Q9BPW9 319 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 PARD6AQ9NPB6 346 aa21.08■□□□□ 0.97
TMEM260-207ENST00000555497 RPS10-NUDT3A0A1W2PQS6 291 aa21.08■□□□□ 0.96
TMEM260-207ENST00000555497 FARS2O95363 451 aaKnown RBP21.08■□□□□ 0.96
TMEM260-207ENST00000555497 IFNA7P01567 189 aa21.08■□□□□ 0.96
TMEM260-207ENST00000555497 AKR1C4P17516 323 aa21.08■□□□□ 0.96
TMEM260-207ENST00000555497 M6PRP20645 277 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms