RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 GUK1Q16774 197 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF66Q6ZN08 573 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 TP53I13Q8NBR0 393 aaPredicted RBP12.52□□□□□ -0.41
VTI1B-204ENST00000554659 TMEM37Q8WXS4 190 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 ST6GAL2Q96JF0 529 aa12.52□□□□□ -0.41
VTI1B-204ENST00000554659 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 SFT2D2O95562 160 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
VTI1B-204ENST00000554659 ABI3BPQ7Z7G0 1075 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 ALG14Q96F25 216 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 B4GALT1P15291 398 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 CCL11P51671 97 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 SPACA9Q96E40 222 aaPredicted RBP12.51□□□□□ -0.41
VTI1B-204ENST00000554659 COMMD5Q9GZQ3 224 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 COL18A1P39060 1754 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 A0A096LPE4 126 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 IGHV3-15A0A0B4J1V0 119 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 A0A1W2PPZ6 126 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 ANKRD20A5PA0PJZ0 165 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 CTDSPLO15194 276 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 SCGB1C2P0DMR2 95 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 PTHLHP12272 177 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 FUT3P21217 361 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF117Q03924 483 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 GSTZ1O43708 216 aaPredicted RBP12.51□□□□□ -0.41
VTI1B-204ENST00000554659 PIAS2O75928 621 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 MVDP53602 400 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 BPIFB3P59826 476 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
VTI1B-204ENST00000554659 FUT7Q11130 342 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 PRICKLE4Q2TBC4 344 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 MOGAT2Q3SYC2 334 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 DEFB108BQ8NET1 73 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 EDARADDQ8WWZ3 215 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 EID2BQ96D98 161 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 S1PR3Q99500 378 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
VTI1B-204ENST00000554659 CACNA1CQ13936 2221 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ECM29Q5VYK3 1845 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CLEC18AA5D8T8 446 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CST7O76096 145 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CD96P40200 585 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ERVFC1-1P60608 527 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 PPP1R1AQ13522 171 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF429Q86V71 674 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 AMER3Q8N944 861 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CLEC18CQ8NCF0 446 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 C17orf47Q8NEP4 570 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 MMP24Q9Y5R2 645 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 V9GYH0 126 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 SPRY1O43609 319 aaPredicted RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CDAP32320 146 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 GPR3P46089 330 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 DSCR4P56555 118 aaPredicted RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 PPP1CBP62140 327 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 IQCJQ1A5X6 159 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 MIDNQ504T8 468 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 LINC01555Q8NAE3 123 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 NUP205Q92621 2012 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ZC3HAV1LQ96H79 300 aaKnown RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CHRDL1Q9BU40 450 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 MENTQ9BUN1 341 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 SIRT3Q9NTG7 399 aaPredicted RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 METAP1P53582 386 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ERHP84090 104 aaKnown RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 INSM1Q01101 510 aaPredicted RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 PHF7Q9BWX1 381 aaPredicted RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 C9orf170A2RU37 121 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 Q7L0L9 218 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 TSEN54Q7Z6J9 526 aaKnown RBP12.5□□□□□ -0.41
VTI1B-204ENST00000554659 OR2V1Q8NHB1 315 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ERGIC1Q969X5 290 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 ZNF391Q9UJN7 358 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 TRAPPC1Q9Y5R8 145 aa12.5□□□□□ -0.41
VTI1B-204ENST00000554659 CCDC187A0A096LP49 1063 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 BMPR1BO00238 502 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
VTI1B-204ENST00000554659 OR10X1Q8NGY0 326 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 OR1F12Q8NHA8 337 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 EXTL1Q92935 676 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 MRGPRX3Q96LB0 322 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 TRBV5-3A0A0A0MS03 114 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 RGS13O14921 159 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 SULT1A3P0DMM9 295 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 SULT1A4P0DMN0 295 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 ABCD3P28288 659 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 DMKNQ6E0U4 476 aaPredicted RBP12.49□□□□□ -0.41
VTI1B-204ENST00000554659 OR4C3Q8NH37 302 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 APOBEC3DQ96AK3 386 aaPredicted RBP12.49□□□□□ -0.41
VTI1B-204ENST00000554659 NOL4LQ96MY1 436 aaPredicted RBP12.49□□□□□ -0.41
VTI1B-204ENST00000554659 TSPAN32Q96QS1 320 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 PRO1933Q9H354 126 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 SHROOM3Q8TF72 1996 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 A0A1W2PNV4 684 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 ZG16BQ96DA0 208 aa12.49□□□□□ -0.41
VTI1B-204ENST00000554659 TRAV34A0A0B4J273 112 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms