RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FZR1Q9UM11 496 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 AK6Q9Y3D8 172 aaKnown RBP10.65□□□□□ -0.7
SHMT2-214ENST00000554604 LRP12Q9Y561 859 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 R4GMQ9 66 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 V9GY05 133 aa10.65□□□□□ -0.7
SHMT2-214ENST00000554604 IFITM5A6NNB3 132 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 AIPO00170 330 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 MPZL1O95297 269 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 FAM157BP0CG42 384 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 CALCBP10092 127 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 CCL2P13500 99 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 CFPP27918 469 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 APLNRP35414 380 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 RFX2P48378 723 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 PITPNBP48739 271 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF133P52736 654 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-214ENST00000554604 SCAND1P57086 179 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 PABPC1L2AQ5JQF8 200 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 RGS7BPQ6MZT1 257 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-214ENST00000554604 DCXRQ7Z4W1 244 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 NRARPQ7Z6K4 114 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-214ENST00000554604 LRRTM1Q86UE6 522 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 C19orf18Q8NEA5 215 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 OR5H6Q8NGV6 325 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 RNF133Q8WVZ7 376 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 C11orf40Q8WZ69 217 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 COL6A5A8TX70 2615 aa10.64□□□□□ -0.71
SHMT2-214ENST00000554604 A0A0G2JMP0 313 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 A0A0X1KG70 313 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 A0A1W2PPL8 197 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 PLA2G10O15496 165 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 PAHP00439 452 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 PNPP00491 289 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 ISG15P05161 165 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF32P17041 273 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 CCNOP22674 350 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 RAD52P43351 418 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 ALDH3B1P43353 468 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 SOX2P48431 317 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 PITPNAQ00169 270 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 NKPD1Q17RQ9 610 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 MSMPQ1L6U9 139 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 UBE2NLQ5JXB2 153 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 OTPQ5XKR4 325 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 CYB5R2Q6BCY4 276 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 RHOUQ7L0Q8 258 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 SYT9Q86SS6 491 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 PAQR4Q8N4S7 273 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-214ENST00000554604 OR4M2Q8NGB6 313 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 ZNF671Q8TAW3 534 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 UBASH3BQ8TF42 649 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 WACQ9BTA9 647 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 BCL2L14Q9BZR8 327 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 BRD7Q9NPI1 651 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 CYB5R1Q9UHQ9 305 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 GPR160Q9UJ42 338 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 ETV7Q9Y603 341 aa10.63□□□□□ -0.71
SHMT2-214ENST00000554604 CTDSPLO15194 276 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MMP7P09237 267 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-214ENST00000554604 H2BFMP0C1H6 154 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 ACHEP22303 614 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 STOMP27105 288 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MAGEB1P43366 347 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MAP2K3P46734 347 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 GZMKP49863 264 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MMP16P51512 607 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 UCP2P55851 309 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 KLF3P57682 345 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-214ENST00000554604 PCBD1P61457 104 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MFGE8Q08431 387 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-214ENST00000554604 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MZT2BQ6NZ67 158 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 UNQ6126/PRO20091Q6UXV3 157 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 FOXL2NBQ6ZUU3 175 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 LRP11Q86VZ4 500 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 PRIMA1Q86XR5 153 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 LINC00346Q8IVM7 164 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 OR10AC1Q8NH08 325 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 SYNPRQ8TBG9 265 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 LGALS14Q8TCE9 139 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 TSEN15Q8WW01 171 aaKnown RBP10.62□□□□□ -0.71
SHMT2-214ENST00000554604 TMEM106AQ96A25 262 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 NABP1Q96AH0 204 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 BPESC1Q9GZL8 116 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 C11orf54Q9H0W9 315 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-214ENST00000554604 G6PC2Q9NQR9 355 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 EIF3KQ9UBQ5 218 aaKnown RBP10.62□□□□□ -0.71
SHMT2-214ENST00000554604 FOXJ3Q9UPW0 622 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 SLC22A13Q9Y226 551 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 MXRA5Q9NR99 2828 aa10.62□□□□□ -0.71
SHMT2-214ENST00000554604 IGHV4-61A0A0C4DH41 118 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 C5orf49A4QMS7 147 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 TPPPO94811 219 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 CD2P06729 351 aa10.61□□□□□ -0.71
SHMT2-214ENST00000554604 CST2P09228 141 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms