RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 DUSP2Q05923 314 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 MESP2Q0VG99 397 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 GPR18Q14330 331 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 OR1Q1Q15612 314 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CEBPEQ15744 281 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 TAF9Q16594 264 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 TMEM183BQ1AE95 376 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 ELOA3BQ3SY89 546 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 MORN2Q502X0 79 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 LINC01590Q5TEZ4 76 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 AGBL4Q5VU57 503 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 TOMM20LQ6UXN7 152 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CATSPERDQ86XM0 798 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 LILRA3Q8N6C8 439 aaPredicted RBP8.45□□□□□ -1.06
SIX4-202ENST00000554079 ELOA3Q8NG57 546 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 OR2L2Q8NH16 312 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 PPTC7Q8NI37 304 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 ZPLD1Q8TCW7 415 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 IL17FQ96PD4 163 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CIB3Q96Q77 187 aaPredicted RBP8.45□□□□□ -1.06
SIX4-202ENST00000554079 TBL1XR1Q9BZK7 514 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CTDSP1Q9GZU7 261 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CST9LQ9H4G1 147 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 SLC2A9Q9NRM0 540 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 FLRT3Q9NZU0 649 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 RNF24Q9Y225 148 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 ST3GAL6Q9Y274 331 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CEP350Q5VT06 3117 aa8.45□□□□□ -1.06
SIX4-202ENST00000554079 CENPVL1A0A0U1RR11 272 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 TMEM212A6NML5 194 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 RPS4Y1P22090 263 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 CDC34P49427 236 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 CDC42EP1Q00587 391 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 ZP2Q05996 745 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 COL9A2Q14055 689 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 CST9Q5W186 159 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 WDR25Q64LD2 544 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 PLXDC2Q6UX71 529 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 Q6ZVH6 145 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 TMCO2Q7Z6W1 182 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 ZNF676Q8N7Q3 588 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 PLPP7Q8NBV4 271 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 OR4C5Q8NGB2 326 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 OR56A1Q8NGH5 318 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 RPUSD4Q96CM3 377 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 SMIM12Q96EX1 92 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 MS4A10Q96PG2 267 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 RTBDNQ9BSG5 229 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 ZNF552Q9H707 407 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 ZNF430Q9H8G1 570 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 IL19Q9UHD0 177 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 MED31Q9Y3C7 131 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 PAM16Q9Y3D7 125 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 MRPS18BQ9Y676 258 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 TCF20Q9UGU0 1960 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 IGHV2OR16-5A0A0B4J2B6 119 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 ANKUB1A6NFN9 424 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 ADM5C9JUS6 153 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 CYR61O00622 381 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 NUDT21O43809 227 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 PIAS2O75928 621 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 CD55P08174 381 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 CDK3Q00526 305 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 REEP5Q00765 189 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 TSTA3Q13630 321 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 IAH1Q2TAA2 248 aaPredicted RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 LDLRAD2Q5SZI1 272 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 FBXO42Q6P3S6 717 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 ZNF738Q8NE65 137 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 OR10S1Q8NGN2 331 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 OR6K6Q8NGW6 343 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 CLDND2Q8NHS1 167 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 UBE2E3Q969T4 207 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 TMEM56Q96MV1 263 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 DCBLD2Q96PD2 775 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 LSM5Q9Y4Y9 91 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 RBM7Q9Y580 266 aaKnown RBP8.44□□□□□ -1.06
SIX4-202ENST00000554079 TMEM56-RWDD3S4R434 201 aa8.44□□□□□ -1.06
SIX4-202ENST00000554079 DOCK8Q8NF50 2099 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 DNAJC25-GNG10A0A024R161 153 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 TRAV30A0A087WSZ9 112 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 LOC102723971A0A1B0GUV8 181 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 GPR137BO60478 399 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 SYNGR4O95473 234 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 NID1P14543 1247 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 MMP9P14780 707 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 PI3P19957 117 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
SIX4-202ENST00000554079 C9orf50Q5SZB4 431 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 UNQ5815/PRO19632Q6UWF5 114 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 SGPP2Q8IWX5 399 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 OR2M7Q8NG81 312 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 OR4D5Q8NGN0 318 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 GPR146Q96CH1 333 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 C4orf45Q96LM5 186 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 IMMP2LQ96T52 175 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 TM7SF3Q9NS93 570 aa8.43□□□□□ -1.06
SIX4-202ENST00000554079 RXFP3Q9NSD7 469 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms