RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 RTL8AQ9BWD3 113 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 PAPOLGQ9BWT3 736 aaKnown RBP10.96□□□□□ -0.65
PRPF39-204ENST00000553605 YY1AP1Q9H869 796 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 SP140LQ9H930 580 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 LIN7BQ9HAP6 207 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 ZFP57Q9NU63 452 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 ZNF222Q9UK12 451 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
PRPF39-204ENST00000553605 RHBDD3Q9Y3P4 386 aa10.96□□□□□ -0.65
PRPF39-204ENST00000553605 TMEM210A6NLX4 147 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 J3KTA2 159 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 RENP00797 406 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 NOS3P29474 1203 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF273Q14593 569 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 CYBRD1Q53TN4 286 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF329Q86UD4 541 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 ZBTB46Q86UZ6 589 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 CALHM1Q8IU99 346 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 KLHL30-AS1Q8NEE0 82 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 FAM46AQ96IP4 442 aaKnown RBP10.95□□□□□ -0.66
PRPF39-204ENST00000553605 DUX3Q96PT4 197 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 NMNAT3Q96T66 252 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 COPS4Q9BT78 406 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 MRPL22Q9NWU5 206 aaKnown RBP10.95□□□□□ -0.66
PRPF39-204ENST00000553605 SCOCQ9UIL1 159 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 KCNG2Q9UJ96 466 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 TMEM5Q9Y2B1 443 aa10.95□□□□□ -0.66
PRPF39-204ENST00000553605 SH2D7A6NKC9 451 aaPredicted RBP10.94□□□□□ -0.66
PRPF39-204ENST00000553605 C17orf98A8MV24 154 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 FFAR1O14842 300 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 ANGPT2O15123 496 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 TBX1O43435 398 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 SNRNP70P08621 437 aaKnown RBP10.94□□□□□ -0.66
PRPF39-204ENST00000553605 PGA5P0DJD9 388 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF823P16415 610 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 RPS27P42677 84 aaKnown RBP10.94□□□□□ -0.66
PRPF39-204ENST00000553605 IDH3AP50213 366 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 SEC23BQ15437 767 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 TIGD6Q17RP2 521 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 FAM76BQ5HYJ3 339 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 KCTD8Q6ZWB6 473 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 OVCH2Q7RTZ1 564 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 THAP5Q7Z6K1 395 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 OR4C15Q8NGM1 316 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 BCAS4Q8TDM0 211 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 SGK3Q96BR1 496 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 ISOC1Q96CN7 298 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 REEP6Q96HR9 211 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 ERMAPQ96PL5 475 aaPredicted RBP10.94□□□□□ -0.66
PRPF39-204ENST00000553605 KCNJ15Q99712 375 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 EBF4Q9BQW3 602 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 C1orf21Q9H246 121 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 RPRD1BQ9NQG5 326 aaKnown RBP10.94□□□□□ -0.66
PRPF39-204ENST00000553605 SNX13Q9Y5W8 968 aa10.94□□□□□ -0.66
PRPF39-204ENST00000553605 CCL24O00175 119 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 AMY1AP04745 511 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 AMY2AP04746 511 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 CD24P25063 80 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 GSK3AP49840 483 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 DLX6P56179 175 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 FXYD6P3P58550 94 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 SELENOWP63302 87 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 TAF13Q15543 124 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 LRRC23Q53EV4 343 aaPredicted RBP10.93□□□□□ -0.66
PRPF39-204ENST00000553605 C9orf152Q5JTZ5 239 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 MINOS1Q5TGZ0 78 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 LCN8Q6JVE9 175 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 ZDHHC21Q8IVQ6 265 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 CSNK2A3Q8NEV1 391 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 OR5M8Q8NGP6 311 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 OR5P3Q8WZ94 311 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 STMN2Q93045 179 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 RAX2Q96IS3 184 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 RNF170Q96K19 258 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 SLC25A33Q9BSK2 321 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 CCDC28BQ9BUN5 200 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 MPC1Q9Y5U8 109 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 MINOS1-NBL1R4GNA1 71 aa10.93□□□□□ -0.66
PRPF39-204ENST00000553605 hCG_38984A0A1B0GV85 526 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF850A8MQ14 1090 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 SEC14L6B5MCN3 397 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 LY86O95711 162 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 IGHV1-8P0DP01 117 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 DCTDP32321 178 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 KDELR2P33947 212 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 SNCBQ16143 134 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 TNFAIP8L3Q5GJ75 292 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 NANOGP8Q6NSW7 305 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 DCXRQ7Z4W1 244 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF695Q8IW36 515 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 FTMTQ8N4E7 242 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 ZNF561Q8N587 486 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 OR4K13Q8NH42 304 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 NDNFQ8TB73 568 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 RBMXL1Q96E39 390 aaKnown RBP10.92□□□□□ -0.66
PRPF39-204ENST00000553605 RSRC1Q96IZ7 334 aaKnown RBP10.92□□□□□ -0.66
PRPF39-204ENST00000553605 RBM14Q96PK6 669 aaKnown RBP10.92□□□□□ -0.66
PRPF39-204ENST00000553605 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
PRPF39-204ENST00000553605 CENPMQ9NSP4 180 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms