RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 PPIAP62937 165 aaKnown RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 TLE3Q04726 772 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 ELFN2Q5R3F8 820 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 Q6ZTK2 550 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 BMPERQ8N8U9 685 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 OR4F15Q8NGB8 312 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 OR6N1Q8NGY5 312 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 M1APQ8TC57 530 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 WFDC5Q8TCV5 224 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 TNFAIP8L1Q8WVP5 186 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 CMBLQ96DG6 245 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 KCTD7Q96MP8 289 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 PRR25Q96S07 402 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 POLR2J2Q9GZM3 115 aaKnown RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 MMP25Q9NPA2 562 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 SLC23A2Q9UGH3 650 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 LINC01553A4QN01 128 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 ZNF814B7Z6K7 855 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 SIVA1O15304 175 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 TAPBPO15533 448 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 EMC8O43402 210 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 CREBL2O60519 120 aaPredicted RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 RAMP3O60896 148 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 SFTPBP07988 381 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 OMGP23515 440 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 DCTP40126 519 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 CNN1P51911 297 aaKnown RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 POLR2HP52434 150 aaKnown RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 ZNF266Q14584 549 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 VWA2Q5GFL6 755 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 TMEM244Q5VVB8 128 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 TMEM215Q68D42 235 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 WDR74Q6RFH5 385 aaPredicted RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 DRAM2Q6UX65 266 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 RPTNQ6XPR3 784 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 C5orf24Q7Z6I8 188 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 CMTM4Q8IZR5 234 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 SLC5A8Q8N695 610 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 OR4K15Q8NH41 348 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 SPRYD4Q8WW59 207 aaPredicted RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 CXorf40BQ96DE9 158 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 SFRP2Q96HF1 295 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 NIPSNAP1Q9BPW8 284 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 NPFFR1Q9GZQ6 430 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 ALG9Q9H6U8 611 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 ZNF665Q9H7R5 613 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 HINT3Q9NQE9 182 aaKnown RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 LOXL2Q9Y4K0 774 aa3.57□□□□□ -1.84
RDH11-204ENST00000553578 CHD3Q12873 2000 aaKnown RBP3.57□□□□□ -1.84
RDH11-204ENST00000553578 DOCK6Q96HP0 2047 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 NUP214P35658 2090 aaPredicted RBP3.56□□□□□ -1.84
RDH11-204ENST00000553578 ASPDHA6ND91 283 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 MBD3L5A6NJ08 208 aaPredicted RBP3.56□□□□□ -1.84
RDH11-204ENST00000553578 ZNF670-ZNF695F2Z2N8 137 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 SGK494L7N484 410 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ZNF749O43361 778 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ACTL6AO96019 429 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 IGHG4P01861 327 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 MT-ND4P03905 459 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 RHOCP08134 193 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 OR10J4P0C629 311 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 LINC00032P0C843 101 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 GZMBP10144 247 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ACP2P11117 423 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 CCL2P13500 99 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 GNRHRP30968 328 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 MAS1LP35410 378 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ARR3P36575 388 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 RPL4P36578 427 aaKnown RBP3.56□□□□□ -1.84
RDH11-204ENST00000553578 CSNK1A1P48729 337 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 PRLHRP49683 370 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ASCL1P50553 236 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 OR4D2P58180 307 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 C1QTNF8P60827 252 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 TAF13Q15543 124 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 MAPK14Q16539 360 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 GSG1Q2KHT4 349 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 NRN1LQ496H8 165 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 EIPR1Q53HC9 387 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ZNF730Q6ZMV8 503 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 COX15Q7KZN9 410 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 FAM220AQ7Z4H9 259 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 C1orf210Q8IVY1 113 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 PIANPQ8IYJ0 282 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ACBD7Q8N6N7 88 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 OR4K1Q8NGD4 311 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 OR51A7Q8NH64 312 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 OR56B4Q8NH76 319 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 GGHQ92820 318 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 C4orf36Q96KX1 117 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ZNF75AQ96N20 296 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 UHRF2Q96PU4 802 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 NRIP2Q9BQI9 281 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 EGLN1Q9GZT9 426 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ATG10Q9H0Y0 220 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 SEC61A2Q9H9S3 476 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 COMMD9Q9P000 198 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 B3GAT1Q9P2W7 334 aa3.56□□□□□ -1.84
RDH11-204ENST00000553578 ADAM29Q9UKF5 820 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms