RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 ASCC1Q8N9N2 400 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 PNLDC1Q8NA58 520 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM178AQ8NBL3 297 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 STEAP2Q8NFT2 490 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 SEMA6DQ8NFY4 1073 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 OR56B1Q8NGI3 324 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CPNE2Q96FN4 548 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 FAHD2AQ96GK7 314 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 WDYHV1Q96HA8 205 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 BOD1Q96IK1 185 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM71F1Q96KD3 344 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 TECTBQ96PL2 329 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 PRRT1Q99946 306 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM246Q9BRR3 403 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 URM1Q9BTM9 101 aaKnown RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 C1QTNF5Q9BXJ0 243 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 BEX2Q9BXY8 128 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 HES7Q9BYE0 225 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF436Q9C0F3 470 aaPredicted RBP5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 OR10A4Q9H209 315 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 ESPL1Q14674 2120 aa5.23□□□□□ -1.57
VIPAS39-204ENST00000553576 CACNA1HO95180 2353 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 A0A0A6YYD4 124 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM235A6NFC5 223 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF736B4DX44 427 aaPredicted RBP5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 DISC1C4P0D8 188 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 AKR7A2O43488 359 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ATP6V1G1O75348 118 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 RGS11O94810 467 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 F10P00742 488 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 IGHG3P01860 377 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 HCKP08631 526 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 CELA3AP09093 270 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 DBHP09172 617 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 GIPP09681 153 aaPredicted RBP5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 VSIG10L2P0DP72 767 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 CEACAM1P13688 526 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF24P17028 368 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 HLA-GP17693 338 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 PRKACBP22694 351 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ACKR3P25106 362 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 RAD52P43351 418 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC6A9P48067 706 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TNFSF10P50591 281 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZP1P60852 638 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 RAP2BP61225 183 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 FAM3AP98173 230 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 DHODHQ02127 395 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 PLGLB1Q02325 96 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 HGFACQ04756 655 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SRSF4Q08170 494 aaKnown RBP5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TCF15Q12870 199 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 GFOD2Q3B7J2 385 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SNAI3Q3KNW1 292 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF766Q5HY98 468 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 CLVS2Q5SYC1 327 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF774Q6NX45 483 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 LINC00696Q6ZRV3 163 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TMPRSS7Q7RTY8 843 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 RNF144BQ7Z419 303 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 FJX1Q86VR8 437 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 COMMD2Q86X83 199 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF584Q8IVC4 421 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TUSC5Q8IXB3 177 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF101Q8IZC7 436 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 BPIFB2Q8N4F0 458 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZDHHC22Q8N966 263 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 UXS1Q8NBZ7 420 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ACBD4Q8NC06 268 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM104Q8NE00 496 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 DEFB124Q8NES8 71 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 Q8NFD4 153 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 PXT1Q8NFP0 134 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 BEST4Q8NFU0 473 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 OR4D10Q8NGI6 311 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 OR51S1Q8NGJ8 323 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 GRPEL2Q8TAA5 225 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 FGFBP3Q8TAT2 258 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ABHD3Q8WU67 409 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 CCDC107Q8WV48 283 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 MRPS24Q96EL2 167 aaKnown RBP5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 REEP6Q96HR9 211 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 GPR137Q96N19 417 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC6A7Q99884 636 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 GINS4Q9BRT9 223 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 TMEM59Q9BXS4 323 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SELENOIQ9C0D9 397 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 CST11Q9H112 138 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 IRF2BPLQ9H1B7 796 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC6A15Q9H2J7 730 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 GLRX2Q9NS18 164 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 SLC7A10Q9NS82 523 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 B3GNT2Q9NY97 397 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 NKIRAS2Q9NYR9 191 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 PIPOXQ9P0Z9 390 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 ZNF222Q9UK12 451 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 KLK13Q9UKR3 277 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 HSF4Q9ULV5 492 aa5.22□□□□□ -1.57
VIPAS39-204ENST00000553576 PIGLQ9Y2B2 252 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms