RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 RNPEPL1Q9HAU8 725 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 GPR173Q9NS66 373 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 ZNF391Q9UJN7 358 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 PIGLQ9Y2B2 252 aa15.04■□□□□ -0
SHMT2-206ENST00000553529 A0A1B0GTI1 187 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 ANXA2P2A6NMY6 339 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 SYNGR1O43759 233 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 CFL1P23528 166 aaKnown RBP15.03■□□□□ -0
SHMT2-206ENST00000553529 PRTN3P24158 256 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 RIDAP52758 137 aaKnown RBP15.03■□□□□ -0
SHMT2-206ENST00000553529 KLRD1Q13241 179 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 ZIK1Q3SY52 487 aaPredicted RBP15.03■□□□□ -0
SHMT2-206ENST00000553529 WDFY2Q96P53 400 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 RAB3IPQ96QF0 476 aaPredicted RBP15.03■□□□□ -0
SHMT2-206ENST00000553529 JMJD8Q96S16 334 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 OSBPL10Q9BXB5 764 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 TEX12Q9BXU0 123 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 OR51I2Q9H344 312 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 HAO2Q9NYQ3 351 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 NUFIP1Q9UHK0 495 aaKnown RBP15.03■□□□□ -0
SHMT2-206ENST00000553529 RPUSD1Q9UJJ7 312 aaKnown RBP15.03■□□□□ -0
SHMT2-206ENST00000553529 PCDHGB1Q9Y5G3 927 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 MPC1Q9Y5U8 109 aa15.03■□□□□ -0
SHMT2-206ENST00000553529 ZNF816-ZNF321PA0A0X1KG74 233 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 A0A1W2PQL4 384 aaPredicted RBP15.02■□□□□ -0
SHMT2-206ENST00000553529 COMPP49747 757 aaPredicted RBP15.02■□□□□ -0
SHMT2-206ENST00000553529 IL5RAQ01344 420 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 MICBQ29980 383 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 PLCXD3Q63HM9 321 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 KCTD18Q6PI47 426 aaPredicted RBP15.02■□□□□ -0
SHMT2-206ENST00000553529 RBMS3Q6XE24 437 aaKnown RBP15.02■□□□□ -0
SHMT2-206ENST00000553529 C9orf139Q6ZV77 190 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 RNF166Q96A37 237 aaPredicted RBP15.02■□□□□ -0
SHMT2-206ENST00000553529 GABARAPL3Q9BY60 117 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 SIRT7Q9NRC8 400 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 ONECUT1Q9UBC0 465 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 KAAG1Q9UBP8 84 aa15.02■□□□□ -0
SHMT2-206ENST00000553529 IGKV1D-17A0A075B6S4 117 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 A0A0U1RQK1 487 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 A0A0U1RQV5 110 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 LOC110117498-PIK3R3F6TDL0 507 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 EI24O14681 340 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 CIB2O75838 187 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 PPIAL4GP0DN37 164 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 NPY4RP50391 375 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 RASSF2P50749 326 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 MZT1Q08AG7 82 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 FAM76BQ5HYJ3 339 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 HAGHLQ6PII5 290 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-206ENST00000553529 VMO1Q7Z5L0 202 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 PIP4P2Q8N4L2 257 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 OR14K1Q8NGZ2 314 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 ANGPTL6Q8NI99 470 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 NPRL2Q8WTW4 380 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 H1FXQ92522 213 aaKnown RBP15.01□□□□□ -0.01
SHMT2-206ENST00000553529 EME1Q96AY2 570 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 CENPNQ96H22 339 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-206ENST00000553529 CLN6Q9NWW5 311 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 H2AFY2Q9P0M6 372 aaPredicted RBP15.01□□□□□ -0.01
SHMT2-206ENST00000553529 OR52A1Q9UKL2 312 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 R4GMQ9 66 aa15.01□□□□□ -0.01
SHMT2-206ENST00000553529 SLC22A31A6NKX4 558 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ZNF670-ZNF695F2Z2N8 137 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ATP5HO75947 161 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 RNASE1P07998 156 aaKnown RBP15□□□□□ -0.01
SHMT2-206ENST00000553529 MUC1P15941 1255 aaPredicted RBP15□□□□□ -0.01
SHMT2-206ENST00000553529 CPT2P23786 658 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 MAP2K3P46734 347 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 TGM4P49221 684 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ZNF85Q03923 595 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 SRSF4Q08170 494 aaKnown RBP15□□□□□ -0.01
SHMT2-206ENST00000553529 KCNJ8Q15842 424 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ZNF829Q3KNS6 432 aaPredicted RBP15□□□□□ -0.01
SHMT2-206ENST00000553529 ZNF684Q5T5D7 378 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 BCL2L15Q5TBC7 163 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ELMOD2Q8IZ81 293 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 RDH10Q8IZV5 341 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 Q8N7P7 452 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 C3orf56Q8N813 242 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ZNRF1Q8ND25 227 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 LY6G5BQ8NDX9 201 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 OR10H4Q8NGA5 316 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 ASB17Q8WXJ9 295 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 AQP3Q92482 292 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 NLKQ9UBE8 527 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 MAB21L2Q9Y586 359 aa15□□□□□ -0.01
SHMT2-206ENST00000553529 MEX3AA1L020 520 aaKnown RBP14.99□□□□□ -0.01
SHMT2-206ENST00000553529 TMEM210A6NLX4 147 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 INMTO95050 263 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 HKR1P10072 659 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 PSG2P11465 335 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 MDKP21741 143 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-206ENST00000553529 GLRA1P23415 457 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 PAX6P26367 422 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 GABRA2P47869 451 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 ERVFRD-1P60508 538 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 CEACAM21Q3KPI0 293 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 TP53I3Q53FA7 332 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 GPR157Q5UAW9 335 aa14.99□□□□□ -0.01
SHMT2-206ENST00000553529 METTL11BQ5VVY1 283 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms