RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C4orf36Q96KX1 117 aa15.45■□□□□ 0.06
CPSF2-202ENST00000553427 SHARPINQ9H0F6 387 aa15.45■□□□□ 0.06
CPSF2-202ENST00000553427 LPAR2Q9HBW0 351 aa15.45■□□□□ 0.06
CPSF2-202ENST00000553427 TRAV38-1A0A0B4J264 116 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 LOC107986453A0A1B0GWG9 222 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 hCG_1807616A0A1W2PRN6 198 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 OOEPA6NGQ2 149 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 SYT7O43581 403 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 ZNF205O95201 554 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 DCKP27707 260 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 PSMB10P40306 273 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 CSNK2BP67870 215 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 TEX36Q5VZQ5 186 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 LHFPL3Q86UP9 236 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 NRG4Q8WWG1 115 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 NEIL1Q96FI4 390 aaPredicted RBP15.44■□□□□ 0.06
CPSF2-202ENST00000553427 BEX2Q9BXY8 128 aa15.44■□□□□ 0.06
CPSF2-202ENST00000553427 MXRA5Q9NR99 2828 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 A0A0G2JMP0 313 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 A0A0X1KG70 313 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 KIAA1324LA8MWY0 1029 aaPredicted RBP15.43■□□□□ 0.06
CPSF2-202ENST00000553427 SRRM5B3KS81 715 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 J3QLI3 93 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 J3QLW9 94 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 NDUFA2O43678 99 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 NRASP01111 189 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 RPSAP08865 295 aaKnown RBP15.43■□□□□ 0.06
CPSF2-202ENST00000553427 HTR1AP08908 422 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 GNAO1P09471 354 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 FAM157CP0CG43 387 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 LIMS3P0CW19 117 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 LIMS4P0CW20 117 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 RPS2P15880 293 aaKnown RBP15.43■□□□□ 0.06
CPSF2-202ENST00000553427 ZNF19P17023 458 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 NANOS3P60323 173 aaKnown RBP15.43■□□□□ 0.06
CPSF2-202ENST00000553427 ESCO2Q56NI9 601 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 TMEM244Q5VVB8 128 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 PLCXD3Q63HM9 321 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 NLRC3Q7RTR2 1065 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 OR4M2Q8NGB6 313 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 LRRC29Q8WV35 223 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 OR51I2Q9H344 312 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 FRRS1LQ9P0K9 344 aa15.43■□□□□ 0.06
CPSF2-202ENST00000553427 DIMT1Q9UNQ2 313 aaKnown RBP15.43■□□□□ 0.06
CPSF2-202ENST00000553427 H0YHG0 523 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 CDIPTO14735 213 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 TNFRSF13BO14836 293 aaPredicted RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 PIPP12273 146 aaPredicted RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 MUC1P15941 1255 aaPredicted RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 ZFP36P26651 326 aaKnown RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 CD80P33681 288 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 GPM6AP51674 278 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 CEP78Q5JTW2 689 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 KCTD8Q6ZWB6 473 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 ZNF771Q7L3S4 317 aaPredicted RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 TEX29Q8N6K0 151 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 SCCPDHQ8NBX0 429 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 OR8B3Q8NGG8 313 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 C12orf43Q96C57 262 aaKnown RBP15.42■□□□□ 0.06
CPSF2-202ENST00000553427 TECTBQ96PL2 329 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 OR8B2Q96RD0 313 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 CHST5Q9GZS9 411 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 VCX3BQ9H321 246 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 PLEKHA1Q9HB21 404 aa15.42■□□□□ 0.06
CPSF2-202ENST00000553427 ANKRD61A6NGH8 418 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 OR4C45A6NMZ5 311 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 ZNF732B4DXR9 585 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 EGR1P18146 543 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 TGM4P49221 684 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 SEC61A1P61619 476 aaKnown RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 LCN2P80188 198 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 RIPK1Q13546 671 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 ALKBH1Q13686 389 aaKnown RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 ODF4Q2M2E3 257 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 LAIR2Q6ISS4 152 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 MOB3CQ70IA8 216 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 FAM90A1Q86YD7 464 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 PP6455Q8WZ26 134 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 RPL3LQ92901 407 aaKnown RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 SSBP3Q9BWW4 388 aaPredicted RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 METTL17Q9H7H0 456 aaPredicted RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 ISG20L2Q9H9L3 353 aaKnown RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 PLCXD1Q9NUJ7 323 aa15.41■□□□□ 0.06
CPSF2-202ENST00000553427 CNOT2Q9NZN8 540 aaKnown RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 CAB39Q9Y376 341 aaPredicted RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 EXOSC1Q9Y3B2 195 aaKnown RBP15.41■□□□□ 0.06
CPSF2-202ENST00000553427 PQLC2LA1A4F0 135 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 EFCAB10A6NFE3 127 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 C3orf80F5H4A9 247 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 GATBO75879 557 aaKnown RBP15.4■□□□□ 0.06
CPSF2-202ENST00000553427 CCDC159P0C7I6 412 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 PITPNBP48739 271 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 NPY4RP50391 375 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 AQP4P55087 323 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 HOXA4Q00056 320 aaPredicted RBP15.4■□□□□ 0.06
CPSF2-202ENST00000553427 MICBQ29980 383 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 DCAF12L2Q5VW00 463 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 ZNF573Q86YE8 665 aa15.4■□□□□ 0.06
CPSF2-202ENST00000553427 BOLLQ8N9W6 283 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms