RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 IGHV1OR21-1A0A087WYE8 117 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 CYTIPO60759 359 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 SFT2D2O95562 160 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ZP3P21754 424 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 PCMT1P22061 227 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 ZBTB25P24278 435 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 GNB1P62873 340 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 RNF212Q495C1 297 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 JMJD6Q6NYC1 403 aaPredicted RBP10.33□□□□□ -0.76
SYNE2-208ENST00000553289 SLC16A12Q6ZSM3 486 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 Q7L0L9 218 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 DEFB108BQ8NET1 73 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 OR1L3Q8NH93 324 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 RHOFQ9HBH0 211 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 V9GYS6 101 aa10.33□□□□□ -0.76
SYNE2-208ENST00000553289 PAPPAQ13219 1627 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 PRSS44E7EML9 344 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 G3V3Q6 166 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 HPP00738 406 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 FGF7P21781 194 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 AKR1C3P42330 323 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 ANGPTL6Q8NI99 470 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM18Q96B42 140 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 RAB40CQ96S21 281 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM231Q9H6L2 316 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 SERGEFQ9UGK8 458 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 AQP7P3A6NL99 342 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 PTGFRP43088 359 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 FABP6P51161 128 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 GPM6AP51674 278 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 DEFB109BQ30KR1 87 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF425Q6IV72 752 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 PHYHIPLQ96FC7 376 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 NEURL2Q9BR09 285 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 MAGT1Q9H0U3 335 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 RBM38Q9H0Z9 239 aaKnown RBP10.32□□□□□ -0.76
SYNE2-208ENST00000553289 SIRT3Q9NTG7 399 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-208ENST00000553289 SHROOM3Q8TF72 1996 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 A0A1W2PQD3 144 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 CTAG2O75638 210 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 TMEM215Q68D42 235 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 C17orf107Q6ZR85 190 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 ARRDC1-AS1Q9H2J1 176 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 LAMB2P55268 1798 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 TO15178 435 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 CTDSPLO15194 276 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 RAB5AP20339 215 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 C9orf152Q5JTZ5 239 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 C9orf50Q5SZB4 431 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 Q6ZS52 159 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 NUFIP2Q7Z417 695 aaKnown RBP10.32□□□□□ -0.76
SYNE2-208ENST00000553289 VN1R4Q7Z5H5 301 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 EID2BQ96D98 161 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 DHRS9Q9BPW9 319 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF275Q9NSD4 429 aaPredicted RBP10.32□□□□□ -0.76
SYNE2-208ENST00000553289 OR5V1Q9UGF6 321 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 FBXO4Q9UKT5 387 aa10.32□□□□□ -0.76
SYNE2-208ENST00000553289 CPN1P15169 458 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 FAHD2BQ6P2I3 314 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF574Q6ZN55 896 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 DEFB123Q8N688 67 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 SIGLECL1Q8N7X8 197 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 FAHD2AQ96GK7 314 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 MARVELD1Q9BSK0 173 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 ADAT1Q9BUB4 502 aaKnown RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 MMP26Q9NRE1 261 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 COX7A2P2O60397 106 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 WNT1P04628 370 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 VMA21Q3ZAQ7 101 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 C17orf78Q8N4C9 275 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 OR11G2Q8NGC1 345 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 ADGRG7Q96K78 797 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 IGHV5-51A0A0C4DH38 117 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 PLPP3O14495 311 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 F2RP25116 425 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 CNN1P51911 297 aaKnown RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 OR2B8PP59922 312 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 ZNF547Q8IVP9 402 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 AMER3Q8N944 861 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 OR4D9Q8NGE8 314 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 NUBPLQ8TB37 319 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 CTDSP1Q9GZU7 261 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 GSTZ1O43708 216 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 YIF1AO95070 293 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 SLC25A4P12235 298 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 SRD5A2P31213 254 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 SSPNQ14714 243 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 WIPI1Q5MNZ9 446 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-208ENST00000553289 SLC25A30Q5SVS4 291 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 CLRN3Q8NCR9 226 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 OR10G3Q8NGC4 313 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 MCHR2Q969V1 340 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 TAAR3PQ9P1P4 343 aa10.31□□□□□ -0.76
SYNE2-208ENST00000553289 RNASEK-C17orf49H0YIS7 233 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 AVPR2P30518 371 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 EMP3P54852 163 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 LRRC10Q5BKY1 277 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 ZBTB44Q8NCP5 570 aa10.3□□□□□ -0.76
SYNE2-208ENST00000553289 DUSP18Q8NEJ0 188 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms