RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SRRM5B3KS81 715 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
CDK4-215ENST00000553237 AKR7A2O43488 359 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 BAG2O95816 211 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 TFF1P04155 84 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 RNASE1P07998 156 aaKnown RBP13.14□□□□□ -0.31
CDK4-215ENST00000553237 AMY2BP19961 511 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 MAP2K3P46734 347 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 ALDH3A2P51648 485 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 GPM6AP51674 278 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 IKZF1Q13422 519 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 DEGS2Q6QHC5 323 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 FAM71F1Q96KD3 344 aaPredicted RBP13.14□□□□□ -0.31
CDK4-215ENST00000553237 OR8B4Q96RC9 309 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 CNN2Q99439 309 aaKnown RBP13.14□□□□□ -0.31
CDK4-215ENST00000553237 PBOV1Q9GZY1 135 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 CNTD2Q9H8S5 307 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 ABCB9Q9NP78 766 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 DNAJB11Q9UBS4 358 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 ZNF391Q9UJN7 358 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 TMEM14AQ9Y6G1 99 aa13.14□□□□□ -0.31
CDK4-215ENST00000553237 ZNF816-ZNF321PA0A0X1KG74 233 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 ACOD1A6NK06 481 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 SLC22A31A6NKX4 558 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 TMEM210A6NLX4 147 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 CLDN34H7C241 214 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 MAGEB4O15481 346 aaPredicted RBP13.13□□□□□ -0.31
CDK4-215ENST00000553237 ECDO95905 644 aaPredicted RBP13.13□□□□□ -0.31
CDK4-215ENST00000553237 RIDAP52758 137 aaKnown RBP13.13□□□□□ -0.31
CDK4-215ENST00000553237 ROM1Q03395 351 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 MFGE8Q08431 387 aaPredicted RBP13.13□□□□□ -0.31
CDK4-215ENST00000553237 ZIK1Q3SY52 487 aaPredicted RBP13.13□□□□□ -0.31
CDK4-215ENST00000553237 CEP78Q5JTW2 689 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 SLC36A1Q7Z2H8 476 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 GID4Q8IVV7 300 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 PDZD9Q8IXQ8 264 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 ZNF679Q8IYX0 411 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 OR51E1Q8TCB6 317 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 ASB17Q8WXJ9 295 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 STMN2Q93045 179 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 LHX4Q969G2 390 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 APOL4Q9BPW4 351 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 C9orf16Q9BUW7 83 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 SIRPDQ9H106 197 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 GPR84Q9NQS5 396 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 HAO2Q9NYQ3 351 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 RPUSD1Q9UJJ7 312 aaKnown RBP13.13□□□□□ -0.31
CDK4-215ENST00000553237 GTF2A1LQ9UNN4 478 aa13.13□□□□□ -0.31
CDK4-215ENST00000553237 A0A0U1RQV5 110 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 ZNF732B4DXR9 585 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 NDUFB3O43676 98 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 ZNF254O75437 659 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 RHBDL1O75783 438 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 SELLP14151 372 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 BPIFB3P59826 476 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 CDC42P60953 191 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 FAM76BQ5HYJ3 339 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 STUMQ69YW2 141 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 C16orf87Q6PH81 154 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 ZNF322Q6U7Q0 402 aaPredicted RBP13.12□□□□□ -0.31
CDK4-215ENST00000553237 ZBTB49Q6ZSB9 765 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 MOB3CQ70IA8 216 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 THAP5Q7Z6K1 395 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 SLC35F2Q8IXU6 374 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 OR8J1Q8NGP2 316 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 OR10Z1Q8NGY1 313 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 C12orf43Q96C57 262 aaKnown RBP13.12□□□□□ -0.31
CDK4-215ENST00000553237 SLC29A1Q99808 456 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 ADGRL4Q9HBW9 690 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 ONECUT1Q9UBC0 465 aa13.12□□□□□ -0.31
CDK4-215ENST00000553237 IGHV1-69DA0A0B4J2H0 117 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 ANKRD65E5RJM6 399 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 IGHV1-69P01742 117 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 FAHP16930 419 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 OMGP23515 440 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 DCTDP32321 178 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 TGM4P49221 684 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 CXCR4P61073 352 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 PRB3Q04118 309 aaPredicted RBP13.11□□□□□ -0.31
CDK4-215ENST00000553237 RIPPLY1Q0D2K3 151 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 PDCD1Q15116 288 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 ZNF829Q3KNS6 432 aaPredicted RBP13.11□□□□□ -0.31
CDK4-215ENST00000553237 CEACAM21Q3KPI0 293 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 LRRC10Q5BKY1 277 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 PLEKHG7Q6ZR37 379 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 GATAD2BQ8WXI9 593 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 H1FXQ92522 213 aaKnown RBP13.11□□□□□ -0.31
CDK4-215ENST00000553237 UBE2FQ969M7 185 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 EME1Q96AY2 570 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 HRASLS5Q96KN8 279 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 ZNF747Q9BV97 191 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 PRDM13Q9H4Q3 707 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 IMPAD1Q9NX62 359 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 NUFIP1Q9UHK0 495 aaKnown RBP13.11□□□□□ -0.31
CDK4-215ENST00000553237 PIGLQ9Y2B2 252 aa13.11□□□□□ -0.31
CDK4-215ENST00000553237 E9PQ18 207 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 LOC110117498-PIK3R3F6TDL0 507 aa13.1□□□□□ -0.31
CDK4-215ENST00000553237 IGLV3-1P01715 115 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms