RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 HIST1H2AAQ96QV6 131 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 ABHD1Q96SE0 405 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 ATG5Q9H1Y0 275 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 IL36GQ9NZH8 169 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 COPZ2Q9P299 210 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 ZNF107Q9UII5 783 aaPredicted RBP10.86□□□□□ -0.67
CACNB3-217ENST00000550483 TBC1D24Q9ULP9 559 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 DOPEY1Q5JWR5 2465 aa10.86□□□□□ -0.67
CACNB3-217ENST00000550483 PHF3Q92576 2039 aaKnown RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 CACNA1CQ13936 2221 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ARHGAP21Q5T5U3 1957 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 NCOA6Q14686 2063 aaPredicted RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 C5orf63A6NC05 138 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 OR5B21A6NL26 309 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 PRSS44E7EML9 344 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ZNHIT1O43257 154 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 SMPD2O60906 423 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 KDM4BO94953 1096 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 RAC2P15153 192 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 PPP3CBP16298 524 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 FAUP35544 74 aaKnown RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 PTH2RP49190 550 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 IDH3GP51553 393 aaPredicted RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 MTCP1P56278 107 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ACTBP60709 375 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ACTG1P63261 375 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 QRFPP83859 136 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ZNF57Q68EA5 555 aaPredicted RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ZDHHC23Q8IYP9 409 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 SAXO1Q8IYX7 474 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 OR56B2PQ8NGI1 322 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 OR56B1Q8NGI3 324 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 ENKURQ8TC29 256 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 RND1Q92730 232 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 YIPF5Q969M3 257 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 TMEM59Q9BXS4 323 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 METTL9Q9H1A3 318 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 GPR173Q9NS66 373 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 FAIMQ9NVQ4 179 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 RBFOX1Q9NWB1 397 aaKnown RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 RBMX2Q9Y388 322 aaKnown RBP10.85□□□□□ -0.67
CACNB3-217ENST00000550483 SPEF1Q9Y4P9 236 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 SLC25A15Q9Y619 301 aa10.85□□□□□ -0.67
CACNB3-217ENST00000550483 A6NIN4 97 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 CD300LBA8K4G0 201 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 EEF1E1O43324 174 aaKnown RBP10.84□□□□□ -0.67
CACNB3-217ENST00000550483 LYRM1O43325 122 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 TPD52L2O43399 206 aaKnown RBP10.84□□□□□ -0.67
CACNB3-217ENST00000550483 VSIG8P0DPA2 414 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 ANOS1P23352 680 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 CPT2P23786 658 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 PRSS3P35030 304 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 WNT5AP41221 380 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 UCP2P55851 309 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 PPP1CBP62140 327 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 TNK1Q13470 666 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 CEACAM21Q3KPI0 293 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 PLCXD3Q63HM9 321 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
CACNB3-217ENST00000550483 ASCL4Q6XD76 172 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 SNX29P2Q8IUI4 249 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 OR5A2Q8NGI9 324 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 TNFAIP8L1Q8WVP5 186 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 PPP1R14BQ96C90 147 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 PAPOLGQ9BWT3 736 aaKnown RBP10.84□□□□□ -0.67
CACNB3-217ENST00000550483 RHOFQ9HBH0 211 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 PTTG3PQ9NZH4 202 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 JKAMPQ9P055 326 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 STARD10Q9Y365 291 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
CACNB3-217ENST00000550483 RP1L1Q8IWN7 2480 aaPredicted RBP10.83□□□□□ -0.68
CACNB3-217ENST00000550483 A0A0G2JNJ9 132 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 AKR7A2O43488 359 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 RBBP9O75884 186 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 CYB5AP00167 134 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 GSTP1P09211 210 aaKnown RBP10.83□□□□□ -0.68
CACNB3-217ENST00000550483 CSF1P09603 554 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 CCL2P13500 99 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 ZNF35P13682 527 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 CA7P43166 264 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 OR3A4PP47883 348 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 ZP1P60852 638 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 RPS23P62266 143 aaKnown RBP10.83□□□□□ -0.68
CACNB3-217ENST00000550483 MZT1Q08AG7 82 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 PRDX4Q13162 271 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 PPA1Q15181 289 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 TAB1Q15750 504 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 PNLIPRP3Q17RR3 467 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 HIST2H2BCQ6DN03 193 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 RFPL4BQ6ZWI9 263 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 MOB3CQ70IA8 216 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 DUSP18Q8NEJ0 188 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 PIGCQ92535 297 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 LRRC46Q96FV0 321 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 MS4A3Q96HJ5 214 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 DMRTA2Q96SC8 542 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 TM2D1Q9BX74 207 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 Q9UFV3 132 aa10.83□□□□□ -0.68
CACNB3-217ENST00000550483 TINAGQ9UJW2 476 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms