RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ACOD1A6NK06 481 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 G3V2T6 193 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 ZNF254O75437 659 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 MELTFP08582 738 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 MDKP21741 143 aaPredicted RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 EPHA2P29317 976 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 RIDAP52758 137 aaKnown RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 ROM1Q03395 351 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 MFGE8Q08431 387 aaPredicted RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 ATP6AP1Q15904 470 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 ZNF829Q3KNS6 432 aaPredicted RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 CDONQ4KMG0 1287 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 LRRC10Q5BKY1 277 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 FAM76BQ5HYJ3 339 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 FIP1L1Q6UN15 594 aaKnown RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 VMO1Q7Z5L0 202 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 THAP5Q7Z6K1 395 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 ZNF679Q8IYX0 411 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 TCEANCQ8N8B7 351 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 OR51E1Q8TCB6 317 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 ASB17Q8WXJ9 295 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 H1FXQ92522 213 aaKnown RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 PPP1R14AQ96A00 147 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 TMIGD2Q96BF3 282 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 RAB3IPQ96QF0 476 aaPredicted RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 GPR84Q9NQS5 396 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
VPS29-207ENST00000549970 GTF2A1LQ9UNN4 478 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 KPTNQ9Y664 436 aa13.47□□□□□ -0.25
VPS29-207ENST00000549970 CMYA5Q8N3K9 4069 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 FAM181BA6NEQ2 426 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 ZNF732B4DXR9 585 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 RHBDL1O75783 438 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 GLRA1P23415 457 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 DCTDP32321 178 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 TGM4P49221 684 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 CXCR4P61073 352 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 GNG3P63215 75 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 ATPAF1Q5TC12 328 aaPredicted RBP13.46□□□□□ -0.25
VPS29-207ENST00000549970 SLX4IPQ5VYV7 408 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 MOB3CQ70IA8 216 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 MEPCEQ7L2J0 689 aaKnown RBP13.46□□□□□ -0.25
VPS29-207ENST00000549970 LY6G5BQ8NDX9 201 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 GAFA1Q96PS6 74 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 DCTN5Q9BTE1 182 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 CHIAQ9BZP6 476 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 SIRT7Q9NRC8 400 aa13.46□□□□□ -0.25
VPS29-207ENST00000549970 A0A0U1RQK1 487 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 A0A1B0GVI7 797 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 SLC22A31A6NKX4 558 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 ZAR1LA6NP61 321 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 GPR37O15354 613 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 MAGEB4O15481 346 aaPredicted RBP13.45□□□□□ -0.26
VPS29-207ENST00000549970 IGLV3-1P01715 115 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 CRYBA1P05813 215 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 FAHP16930 419 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 FASP25445 335 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 GABRA2P47869 451 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 RASSF2P50749 326 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 PRB3Q04118 309 aaPredicted RBP13.45□□□□□ -0.26
VPS29-207ENST00000549970 RIPPLY1Q0D2K3 151 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 DGUOKQ16854 277 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 CEACAM21Q3KPI0 293 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 C1orf146Q5VVC0 180 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 NXNL2Q5VZ03 156 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 PLCXD3Q63HM9 321 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 KDM4DQ6B0I6 523 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 ZNF322Q6U7Q0 402 aaPredicted RBP13.45□□□□□ -0.26
VPS29-207ENST00000549970 ZNF788Q6ZQV5 615 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 ZDHHC13Q8IUH4 622 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 SLC35F2Q8IXU6 374 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 CMTM4Q8IZR5 234 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 ANGPTL6Q8NI99 470 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 TMEM163Q8TC26 289 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 IL4I1Q96RQ9 567 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 APOL4Q9BPW4 351 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 DNTTIP1Q9H147 329 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 OR51I2Q9H344 312 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 ADGRL4Q9HBW9 690 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 NLKQ9UBE8 527 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 SLC25A10Q9UBX3 287 aaPredicted RBP13.45□□□□□ -0.26
VPS29-207ENST00000549970 NUFIP1Q9UHK0 495 aaKnown RBP13.45□□□□□ -0.26
VPS29-207ENST00000549970 PIGLQ9Y2B2 252 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 AP4S1Q9Y587 144 aa13.45□□□□□ -0.26
VPS29-207ENST00000549970 OR2AT4A6NND4 320 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 POM121CA8CG34 1229 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 LOC110117498-PIK3R3F6TDL0 507 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 ATP6V1B1P15313 513 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 NDUFB7P17568 137 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 DLX1P56177 255 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 AADACL4Q5VUY2 407 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 C12orf73Q69YU5 71 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 KRT74Q7RTS7 529 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 TMEM86BQ8N661 226 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 SSMEM1Q8WWF3 244 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 MED30Q96HR3 178 aa13.44□□□□□ -0.26
VPS29-207ENST00000549970 GABARAPL1Q9H0R8 117 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms