RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GAPDHP04406 335 aaKnown RBP12.1□□□□□ -0.47
HDAC7-228ENST00000548938 ARG1P05089 322 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 THEGLP0DJG4 465 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 RBMXP38159 391 aaKnown RBP12.1□□□□□ -0.47
HDAC7-228ENST00000548938 GLP1RP43220 463 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 DCAF7P61962 342 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF616Q08AN1 781 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 HMGN3Q15651 99 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 LCN10Q6JVE6 187 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 FAM24BQ8N5W8 94 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 RHBDD1Q8TEB9 315 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 BSCL2Q96G97 398 aaPredicted RBP12.1□□□□□ -0.47
HDAC7-228ENST00000548938 TCEAL7Q9BRU2 100 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 SCRT1Q9BWW7 348 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 POLR1DQ9Y2S0 133 aa12.1□□□□□ -0.47
HDAC7-228ENST00000548938 ADAM10O14672 748 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 DEDDO75618 318 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 IFNA2P01563 188 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 ZNF17P17021 662 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 SNCAP37840 140 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 FHITP49789 147 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 ACY1Q03154 408 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 GUK1Q16774 197 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 C5orf46Q6UWT4 87 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 C16orf47Q6ZP98 133 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-228ENST00000548938 EMG1Q92979 244 aaKnown RBP12.09□□□□□ -0.47
HDAC7-228ENST00000548938 PRRX2Q99811 253 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 LRRC61Q9BV99 259 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 BCL2L14Q9BZR8 327 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 SCGB1D2O95969 90 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 IGLV3-19P01714 112 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 HPNP05981 417 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 TAS2R46P59540 309 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 ZP4Q12836 540 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 ADAM5Q6NVV9 412 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 OPN5Q6U736 354 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 TMPRSS9Q7Z410 1059 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 OR51T1Q8NGJ9 327 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 FNDC9Q8TBE3 224 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 DAZLQ92904 295 aaKnown RBP12.09□□□□□ -0.47
HDAC7-228ENST00000548938 URM1Q9BTM9 101 aaKnown RBP12.09□□□□□ -0.47
HDAC7-228ENST00000548938 CUTCQ9NTM9 273 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
HDAC7-228ENST00000548938 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 IGKV1-9A0A0C4DH69 117 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 A0A1W2PPE2 198 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 SHISA8B8ZZ34 492 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 S100PP25815 95 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 HSD11B2P80365 405 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 FAM3AP98173 230 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 C1QL2Q7Z5L3 287 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 NPRL2Q8WTW4 380 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 MRPL24Q96A35 216 aaKnown RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 EIF5A2Q9GZV4 153 aaKnown RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 CHST11Q9NPF2 352 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 C14orf166Q9Y224 244 aaKnown RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 VDAC3Q9Y277 283 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 H3BML4 177 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 C1QL1O75973 258 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 LAP3P28838 519 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 CDAP32320 146 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 CSNK1EP49674 416 aaKnown RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 NSDHLQ15738 373 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 CHRFAM7AQ494W8 412 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 SYT13Q7L8C5 426 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 SLC25A43Q8WUT9 341 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 TUBA4BQ9H853 241 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF701Q9NV72 531 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-228ENST00000548938 CA14Q9ULX7 337 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 THADAQ6YHU6 1953 aa12.08□□□□□ -0.48
HDAC7-228ENST00000548938 MED19A0JLT2 244 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-228ENST00000548938 ZNF878C9JN71 531 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 GIMD1P0DJR0 217 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 PMELP40967 661 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 SULT1A1P50225 295 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 GGNBP1Q5YKI7 109 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 KIAA0895LQ68EN5 471 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 LMAN1LQ9HAT1 526 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 FAM212BQ9NTI7 297 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-228ENST00000548938 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 UMAD1C9J7I0 102 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 BLVRBP30043 206 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-228ENST00000548938 EIF2S3P41091 472 aaKnown RBP12.07□□□□□ -0.48
HDAC7-228ENST00000548938 FOXL2P58012 376 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 MFAP5Q13361 173 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.07□□□□□ -0.48
HDAC7-228ENST00000548938 NCMAPQ5T1S8 102 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 RLN3Q8WXF3 142 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 SPSB2Q99619 263 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 TUBD1Q9UJT1 453 aa12.07□□□□□ -0.48
HDAC7-228ENST00000548938 MASP2O00187 686 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 RD3LP0DJH9 198 aa12.06□□□□□ -0.48
HDAC7-228ENST00000548938 CCR5P51681 352 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms