RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 RAC2P15153 192 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 PSMB1P20618 241 aaKnown RBP11.62□□□□□ -0.55
PTCH1-215ENST00000547672 OR3A4PP47883 348 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 RPS27AP62979 156 aaKnown RBP11.62□□□□□ -0.55
PTCH1-215ENST00000547672 MEF2DQ14814 521 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 PCGF3Q3KNV8 242 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 SLC22A6Q4U2R8 563 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 PLA1AQ53H76 456 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 TIMM23BQ5SRD1 257 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 BTN2A1Q7KYR7 527 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 CXorf67Q86X51 503 aaPredicted RBP11.62□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF584Q8IVC4 421 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 ZDHHC23Q8IYP9 409 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 OR56B4Q8NH76 319 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 AQP3Q92482 292 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 SEH1LQ96EE3 360 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF75AQ96N20 296 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 NEDD4LQ96PU5 975 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 SLX1AQ9BQ83 275 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 PAPOLGQ9BWT3 736 aaKnown RBP11.62□□□□□ -0.55
PTCH1-215ENST00000547672 TM2D1Q9BX74 207 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 HRASLSQ9HDD0 168 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTCH1-215ENST00000547672 ELOVL5Q9NYP7 299 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 PTTG3PQ9NZH4 202 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 KLK11Q9UBX7 282 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF835Q9Y2P0 537 aa11.62□□□□□ -0.55
PTCH1-215ENST00000547672 TMEM8BA6NDV4 472 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 HMX3A6NHT5 357 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 SERPINE3A8MV23 424 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 IGKV3-15P01624 115 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 MGMTP16455 207 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 VEGFCP49767 419 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 UCP2P55851 309 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 GNG2P59768 71 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 PPP1CBP62140 327 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 GTF3C1Q12789 2109 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 KLRB1Q12918 225 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 FOXF2Q12947 444 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 PDZK1IP1Q13113 114 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 UNC119Q13432 240 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF260Q3ZCT1 412 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 ACTBL2Q562R1 376 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 Q6ZTK2 550 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 AKAP14Q86UN6 197 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF573Q86YE8 665 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 OR56B2PQ8NGI1 322 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 UBASH3BQ8TF42 649 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 WBP1Q96G27 269 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 SPACA5Q96QH8 159 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 GAL3ST1Q99999 423 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 LPAR5Q9H1C0 372 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 OR10A4Q9H209 315 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 IFT46Q9NQC8 304 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 MRPL15Q9P015 296 aaKnown RBP11.61□□□□□ -0.55
PTCH1-215ENST00000547672 PLEKHA6Q9Y2H5 1048 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 FAM215AQ9Y5M1 114 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 FREM1Q5H8C1 2179 aa11.61□□□□□ -0.55
PTCH1-215ENST00000547672 URB1O60287 2271 aaKnown RBP11.61□□□□□ -0.55
PTCH1-215ENST00000547672 DOCK7Q96N67 2140 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A10PA6NDY2 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A18PA6NE21 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A16PA6NEW6 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A20PA6NIJ5 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A8PA6NJQ4 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A7PA6NKC0 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 ZNF850A8MQ14 1090 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A22PA8MWA6 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A12PA8MX19 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A5PA8MXJ8 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A23PA8MXZ1 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 WISP2O76076 250 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 H2AFB2P0C5Z0 115 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A15PP0C7V4 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A13PP0C7W8 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A14PP0C7W9 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM90A24PP0C7X0 464 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 FAM157BP0CG42 384 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 GLI4P10075 376 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 GIFP27352 417 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 SRP9P49458 86 aaKnown RBP11.6□□□□□ -0.55
PTCH1-215ENST00000547672 IDH3GP51553 393 aaPredicted RBP11.6□□□□□ -0.55
PTCH1-215ENST00000547672 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 MRPS15P82914 257 aaKnown RBP11.6□□□□□ -0.55
PTCH1-215ENST00000547672 PRDX4Q13162 271 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 TNK1Q13470 666 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 ZMYND11Q15326 602 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 RNASE12Q5GAN4 147 aaKnown RBP11.6□□□□□ -0.55
PTCH1-215ENST00000547672 OR10K2Q6IF99 312 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 SEM1Q6ZVN7 128 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 MRGPRGQ86SM5 289 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 TMEM200AQ86VY9 491 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 DOLPP1Q86YN1 238 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 NPRL2Q8WTW4 380 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 MICU1Q9BPX6 476 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 NEURL2Q9BR09 285 aa11.6□□□□□ -0.55
PTCH1-215ENST00000547672 SELENOIQ9C0D9 397 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms