RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MTURNQ8N3F0 131 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 TAAR6Q96RI8 345 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ACAD8Q9UKU7 415 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 TCRBV21S2A2A0A5A6 115 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 PRAMEF25A6NGN4 478 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 NPIPB9F8W1W9 429 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 M0R135 149 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 IGHEP01854 428 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ADH4P08319 380 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 POU3F2P20265 443 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 PRAMEF5Q5TYX0 476 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 PRAMEF6Q5VXH4 476 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 OLIG3Q7RTU3 272 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 LIMS2Q7Z4I7 341 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF799Q96GE5 643 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 GSX1Q9H4S2 264 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ARID2Q68CP9 1835 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF729A6NN14 1252 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 PRKRAO75569 313 aaKnown RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 NKX2-2O95096 273 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 CXCL2P19875 107 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 PNLIPRP2P54317 469 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 BPIFB3P59826 476 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 RAE1P78406 368 aaKnown RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 Q6ZSR6 202 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 SLC35E3Q7Z769 313 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF738Q8NE65 137 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 C17orf47Q8NEP4 570 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 OR52N4Q8NGI2 321 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 APH1AQ96BI3 265 aa11.5□□□□□ -0.57
PTCH1-212ENST00000546744 PCDHGA9Q9Y5G4 932 aaKnown RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 ARID1BQ8NFD5 2236 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-212ENST00000546744 MASP2O00187 686 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ADAM11O75078 769 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 CD99P14209 185 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ELOBQ15370 118 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 WDR38Q5JTN6 314 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 Q6ZN92 141 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 MORN4Q8NDC4 146 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 NUBPLQ8TB37 319 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 EDARADDQ8WWZ3 215 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 PRRC2BQ5JSZ5 2229 aaKnown RBP11.49□□□□□ -0.57
PTCH1-212ENST00000546744 HSD17B6O14756 317 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 OR2A4O95047 310 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 FUT3P21217 361 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF750Q32MQ0 723 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ABHD17BQ5VST6 288 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 KIRREL2Q6UWL6 708 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF600Q6ZNG1 722 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF573Q86YE8 665 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 BCORP1Q8N888 145 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 OR5AU1Q8NGC0 362 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 OR2A7Q96R45 310 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TRIB1Q96RU8 372 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 CDCA3Q99618 268 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TXNDC17Q9BRA2 123 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 FAM103A1Q9BTL3 118 aaKnown RBP11.49□□□□□ -0.57
PTCH1-212ENST00000546744 NEU3Q9UQ49 428 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 MED16Q9Y2X0 877 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TRIP12Q14669 1992 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-212ENST00000546744 A8MXK9 166 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 M0R1X1 148 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 DEGS1O15121 323 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 CIDEAO60543 219 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ABLIM3O94929 683 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ARG1P05089 322 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ACAA1P09110 424 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-212ENST00000546744 IGFBP4P22692 258 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 STUMQ69YW2 141 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 BTNL3Q6UXE8 466 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 OSR2Q8N2R0 312 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ZFP64Q9NPA5 681 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 MARCH5Q9NX47 278 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 PRSS50Q9UI38 385 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TRPM7Q96QT4 1865 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TLCD2A6NGC4 264 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 NXPH2O95156 264 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 SELEP16581 610 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TMEM91Q6ZNR0 172 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 LILRA3Q8N6C8 439 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-212ENST00000546744 OR5C1Q8NGR4 320 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 ABHD5Q8WTS1 349 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 DYRK2Q92630 601 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 RSRP1Q9BUV0 290 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 RAB33BQ9H082 229 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
PTCH1-212ENST00000546744 TRBV11-1A0A0K0K1C0 115 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF732B4DXR9 585 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 H3BQ15 152 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 OR10J4P0C629 311 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 PVRP15151 417 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF17P17021 662 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 FCARP24071 287 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 AMTP48728 403 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 FUT6P51993 359 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 SPCS3P61009 180 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 FZD2Q14332 565 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 AGERQ15109 404 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 PLGLAQ15195 96 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms