RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 FAM58AQ8N1B3 248 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 NUDT10Q8NFP7 164 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 OR1N1Q8NGS0 311 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 FGF11Q92914 225 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 ADIPOR1Q96A54 375 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 ZNF514Q96K75 400 aaPredicted RBP9.25□□□□□ -0.93
SOD2-216ENST00000546260 ZNF385AQ96PM9 386 aaKnown RBP9.25□□□□□ -0.93
SOD2-216ENST00000546260 SYT3Q9BQG1 590 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 OSGIN2Q9Y236 505 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 MRPS28Q9Y2Q9 187 aaKnown RBP9.25□□□□□ -0.93
SOD2-216ENST00000546260 KLHDC2Q9Y2U9 406 aa9.25□□□□□ -0.93
SOD2-216ENST00000546260 GREB1LQ9C091 1923 aaPredicted RBP9.25□□□□□ -0.93
SOD2-216ENST00000546260 H3BNC9 293 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 NUDT21O43809 227 aaKnown RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 GUSBP08236 651 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 ZNF93P35789 620 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 GUCA1AP43080 201 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 SLC48A1Q6P1K1 146 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 LINC00346Q8IVM7 164 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 ST6GALNAC3Q8NDV1 305 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 NICN1Q9BSH3 213 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 FBXO34Q9NWN3 711 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 FOXD3Q9UJU5 478 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 B4DEV8 164 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 SSSCA1O60232 199 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 LRG1P02750 347 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 FPR2P25090 351 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 P2RY1P47900 373 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 TRA2BP62995 288 aaKnown RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 HIKESHIQ53FT3 197 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 LDLRAD2Q5SZI1 272 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 SLC22A24Q8N4F4 322 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CDRT4Q8N9R6 151 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 OR2T10Q8NGZ9 312 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 TIMP4Q99727 224 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 RSPO3Q9BXY4 272 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 ACTR3CQ9C0K3 210 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 PLK3Q9H4B4 646 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 CXCL11O14625 94 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CLEC3AO75596 197 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 THY1P04216 161 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CD33P20138 364 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 RAB28P51157 221 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 KLF3P57682 345 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 ACKR1Q16570 336 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 DNLZQ5SXM8 178 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 Q7L0L9 218 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 C16orf82Q7Z2V1 217 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 TMEFF1Q8IYR6 380 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 OR52R1Q8NGF1 315 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 STARD4Q96DR4 205 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 HSPB9Q9BQS6 159 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 PLEKHJ1Q9NW61 149 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CD160O95971 181 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 ZNF708P17019 499 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 ATP6V0CP27449 155 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 CEACAM8P31997 349 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 TLE3Q04726 772 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 PNRC1Q12796 327 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 SSPNQ14714 243 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 MMDQ15546 238 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 OR5D14Q8NGL3 314 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 RERGQ96A58 199 aaPredicted RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 B9D1Q9UPM9 204 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 ZFP30Q9Y2G7 519 aa9.24□□□□□ -0.93
SOD2-216ENST00000546260 MRPS18BQ9Y676 258 aaKnown RBP9.24□□□□□ -0.93
SOD2-216ENST00000546260 MAP1LC3B2A6NCE7 125 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 H3BP45 60 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 HMGB3O15347 200 aaKnown RBP9.23□□□□□ -0.93
SOD2-216ENST00000546260 NXPH2O95156 264 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 IGLV3-27P01718 113 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 PMCHP20382 165 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 CDKN2AP42771 156 aaKnown RBP9.23□□□□□ -0.93
SOD2-216ENST00000546260 SLC6A9P48067 706 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 DUSP8Q13202 625 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 SLC35E3Q7Z769 313 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 MYPOPQ86VE0 399 aaPredicted RBP9.23□□□□□ -0.93
SOD2-216ENST00000546260 PGAM5Q96HS1 289 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 GNRHR2Q96P88 292 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 MAP1LC3BQ9GZQ8 125 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 KIAA1456Q9P272 454 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 ITGB1BP1O14713 200 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 TOX4O94842 621 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 CPMP14384 443 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 DUSP1P28562 367 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 CCL20P78556 96 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 SLC17A1Q14916 467 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 BSXQ3C1V8 233 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 FAM78BQ5VT40 261 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 FAM160A2Q8N612 972 aaPredicted RBP9.23□□□□□ -0.93
SOD2-216ENST00000546260 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
SOD2-216ENST00000546260 SP7Q8TDD2 431 aaPredicted RBP9.23□□□□□ -0.93
SOD2-216ENST00000546260 RNF128Q8TEB7 428 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms