RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 ACBD7Q8N6N7 88 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 CCDC54Q8NEL0 328 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 OR5A2Q8NGI9 324 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 OR14K1Q8NGZ2 314 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 LRRC29Q8WV35 223 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 C12orf43Q96C57 262 aaKnown RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 LGALS12Q96DT0 336 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 RNF170Q96K19 258 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 HIST1H2AAQ96QV6 131 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 C7orf69Q9H7B7 122 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 METTL17Q9H7H0 456 aaPredicted RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 ACOXLQ9NUZ1 547 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 MRPS18AQ9NVS2 196 aaKnown RBP9.9□□□□□ -0.82
YBX3-217ENST00000546164 KAAG1Q9UBP8 84 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 CLN8Q9UBY8 286 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 GTF2A1LQ9UNN4 478 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 SLC22A13Q9Y226 551 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 PIGLQ9Y2B2 252 aa9.9□□□□□ -0.82
YBX3-217ENST00000546164 LOC105371242A0A075B767 164 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 C3orf80F5H4A9 247 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 P2RY10O00398 339 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 RPP14O95059 124 aaKnown RBP9.89□□□□□ -0.83
YBX3-217ENST00000546164 PPIAL4GP0DN37 164 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 DBTP11182 482 aaKnown RBP9.89□□□□□ -0.83
YBX3-217ENST00000546164 FAHP16930 419 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 GABPB1Q06547 395 aaPredicted RBP9.89□□□□□ -0.83
YBX3-217ENST00000546164 PAX8Q06710 450 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 CLVS2Q5SYC1 327 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 SFRP4Q6FHJ7 346 aaPredicted RBP9.89□□□□□ -0.83
YBX3-217ENST00000546164 FDX2Q6P4F2 183 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 SCCPDHQ8NBX0 429 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 C19orf18Q8NEA5 215 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 NANPQ8TBE9 248 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 APH1BQ8WW43 257 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 MYCBPQ99417 103 aaPredicted RBP9.89□□□□□ -0.83
YBX3-217ENST00000546164 OR51I2Q9H344 312 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 CTSZQ9UBR2 303 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 AASSQ9UDR5 926 aa9.89□□□□□ -0.83
YBX3-217ENST00000546164 IGHV2-70DA0A0C4DH43 119 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 KIR2DS1A0A191URI9 304 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 A0A1B0GVI7 797 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 DAPL1A0PJW8 107 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 ZNF732B4DXR9 585 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 CASQ2O14958 399 aaPredicted RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 FADS2O95864 444 aaKnown RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 NRASP01111 189 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 IGHA1P01876 353 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 UBCP0CG48 685 aaKnown RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 PEX2P28328 305 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 GPM6AP51674 278 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 ACTA2P62736 377 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 ACTG2P63267 376 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 RAB40BQ12829 278 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 MICBQ29980 383 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 TP53I3Q53FA7 332 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 WDR38Q5JTN6 314 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 CEP78Q5JTW2 689 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 ATPAF1Q5TC12 328 aaPredicted RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 PLCXD3Q63HM9 321 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 LPCAT4Q643R3 524 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 BTNL3Q6UXE8 466 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 KCTD8Q6ZWB6 473 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 SYS1Q8N2H4 156 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 PRSS35Q8N3Z0 413 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 BOLLQ8N9W6 283 aaKnown RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 ZNF555Q8NEP9 628 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 OR2G2Q8NGZ5 317 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 RAB40AQ8WXH6 277 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 RPL3LQ92901 407 aaKnown RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 C10orf35Q96D05 121 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 MRPL48Q96GC5 212 aaKnown RBP9.88□□□□□ -0.83
YBX3-217ENST00000546164 MDFIQ99750 246 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 ZNF649Q9BS31 505 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 DNTTIP1Q9H147 329 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 INPP5EQ9NRR6 644 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 ERVK-18Q9QC07 812 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 GNG8Q9UK08 70 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 AUP1Q9Y679 476 aa9.88□□□□□ -0.83
YBX3-217ENST00000546164 DOCK11Q5JSL3 2073 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 A0A0A6YYJ9 748 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 ADAM20O43506 726 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 SYT7O43581 403 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 WBP4O75554 376 aaKnown RBP9.87□□□□□ -0.83
YBX3-217ENST00000546164 GYPAP02724 150 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 ISG15P05161 165 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 EPHA1P21709 976 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 KIR3DL2P43630 455 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 CCR9P51686 369 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 OR12D2P58182 307 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 GALEQ14376 348 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 LRRC36Q1X8D7 754 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 TUSC1Q2TAM9 212 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 OGFRL1Q5TC84 451 aaPredicted RBP9.87□□□□□ -0.83
YBX3-217ENST00000546164 ZNF691Q5VV52 312 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 TTC23Q5W5X9 447 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 CD276Q5ZPR3 534 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 STUMQ69YW2 141 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 MOB3CQ70IA8 216 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 MRI1Q9BV20 369 aa9.87□□□□□ -0.83
YBX3-217ENST00000546164 JAM3Q9BX67 310 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms