RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MDGA2Q7Z553 956 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 UBE3DQ7Z6J8 389 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 NKAIN4Q8IVV8 208 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 TEX29Q8N6K0 151 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 BPIFCQ8NFQ6 507 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 OR51H1Q8NH63 302 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 OR51E1Q8TCB6 317 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 GHSRQ92847 366 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 TMEM38AQ9H6F2 299 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 TMEM231Q9H6L2 316 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 CLEC2DQ9UHP7 191 aa7.7□□□□□ -1.18
CLIP1-218ENST00000545889 SHISA8B8ZZ34 492 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 ADAM20O43506 726 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 GPX2P18283 190 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 COX7A1P24310 79 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TAS2R19P59542 299 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 FZD5Q13467 585 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 HNF4GQ14541 408 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 MRGPRGQ86SM5 289 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 WNT2BQ93097 391 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 VOPP1Q96AW1 172 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 RAB40ALP0C0E4 278 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CALCBP10092 127 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CEACAM1P13688 526 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 LUMP51884 338 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CLDN12P56749 244 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 DUSP8Q13202 625 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SKP2Q13309 424 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TPBGQ13641 420 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 ACTBL2Q562R1 376 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 GLYATL3Q5SZD4 288 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 OR2G6Q5TZ20 316 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CD276Q5ZPR3 534 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TFAP2EQ6VUC0 442 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SLC25A26Q70HW3 274 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 NT5CQ8TCD5 201 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 EDARADDQ8WWZ3 215 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 RAB40AQ8WXH6 277 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SCARF2Q96GP6 870 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SLC35E1Q96K37 410 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 GLRX2Q9NS18 164 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 OR5V1Q9UGF6 321 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 NUBP2Q9Y5Y2 271 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CDHR4A6H8M9 788 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 PRR19A6NJB7 356 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 MSTNO14793 375 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 BRS3P32247 399 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 GGTLC2Q14390 218 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 RNF151Q2KHN1 245 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SLC35D3Q5M8T2 416 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 C16orf47Q6ZP98 133 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 H2BFWTQ7Z2G1 175 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 NKAIN3Q8N8D7 197 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 OR11H7Q8NGC8 314 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TMEM208Q9BTX3 173 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SCNM1Q9BWG6 230 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TXNIPQ9H3M7 391 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 RGCCQ9H4X1 137 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TXNL4BQ9NX01 149 aaKnown RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 KIF26AQ9ULI4 1882 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.69□□□□□ -1.186e-10■■■■■ 39.3
CLIP1-218ENST00000545889 HEATR5BQ9P2D3 2071 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 OR6C68A6NDL8 312 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 ACAA1P09110 424 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 PRPH2P23942 346 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SDHAP31040 664 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CSF2RBP32927 897 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF133P52736 654 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 WNT3P56703 355 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 HABP2Q14520 560 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 KRTCAP3Q53RY4 240 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 CXorf67Q86X51 503 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 C17orf78Q8N4C9 275 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 SAP25Q8TEE9 199 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 PAQR8Q8TEZ7 354 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 NMNAT2Q9BZQ4 307 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 TMEFF2Q9UIK5 374 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-218ENST00000545889 FZR1Q9UM11 496 aa7.69□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF705GA8MUZ8 300 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 PRR33A8MZF0 331 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ALG1L2C9J202 215 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 K7EQM0 130 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ARPC1BO15143 372 aaKnown RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 CTXN2P0C2S0 81 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 CEACAM3P40198 252 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 NPBWR1P48145 328 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 THBS3P49746 956 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ESPL1Q14674 2120 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 SLC9A3R2Q15599 337 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ATPAF1Q5TC12 328 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 ZNF626Q68DY1 528 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 LAIR2Q6ISS4 152 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 GTPBP8Q8N3Z3 284 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 PFN4Q8NHR9 129 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 DCUN1D4Q92564 292 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 PINX1Q96BK5 328 aaKnown RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 CNTNAP3BQ96NU0 1288 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 GPR84Q9NQS5 396 aa7.68□□□□□ -1.18
CLIP1-218ENST00000545889 CNOT2Q9NZN8 540 aaKnown RBP7.68□□□□□ -1.18
CLIP1-218ENST00000545889 TAAR3PQ9P1P4 343 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms