RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 PINLYPA6NC86 204 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 OR2F2O95006 317 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ACKR3P25106 362 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 CYB561P49447 251 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 HGFACQ04756 655 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 OR2F1Q13607 317 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ZNF345Q14585 488 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ZNF528Q3MIS6 628 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 CCDC157Q569K6 752 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 SEMA6DQ8NFY4 1073 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 OR5M9Q8NGP3 310 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 OR2AE1Q8NHA4 323 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 PSMF1Q92530 271 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ALKBH3Q96Q83 286 aaPredicted RBP15.74■□□□□ 0.11
VIM-209ENST00000544301 DMRTA2Q96SC8 542 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 ELL3Q9HB65 397 aaPredicted RBP15.74■□□□□ 0.11
VIM-209ENST00000544301 GPR173Q9NS66 373 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 MRPS18CQ9Y3D5 142 aaKnown RBP15.74■□□□□ 0.11
VIM-209ENST00000544301 TECTAO75443 2155 aa15.74■□□□□ 0.11
VIM-209ENST00000544301 RLN2P04090 185 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 ZNF883P0CG24 379 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 B4GALT1P15291 398 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 TMEM128Q5BJH2 165 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 JMJD6Q6NYC1 403 aaPredicted RBP15.73■□□□□ 0.11
VIM-209ENST00000544301 TMEM185AQ8NFB2 350 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 OR13G1Q8NGZ3 307 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 TMEM230Q96A57 120 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 TAAR9Q96RI9 348 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 STRADBQ9C0K7 418 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 MYO7BQ6PIF6 2116 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 OR6C6A6NF89 314 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 DHRS7CA6NNS2 312 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 F10P00742 488 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 ZNF32P17041 273 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 CPT2P23786 658 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 GDF1P27539 372 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 RGS19P49795 217 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 SNU13P55769 128 aaKnown RBP15.73■□□□□ 0.11
VIM-209ENST00000544301 UBA52P62987 128 aaKnown RBP15.73■□□□□ 0.11
VIM-209ENST00000544301 SCRN3Q0VDG4 424 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 SIGIRRQ6IA17 410 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 LHFPL1Q86WI0 220 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 ST8SIA2Q92186 375 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 REEP6Q96HR9 211 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 VRK1Q99986 396 aaPredicted RBP15.73■□□□□ 0.11
VIM-209ENST00000544301 C1QTNF6Q9BXI9 259 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 SPRY4Q9C004 299 aa15.73■□□□□ 0.11
VIM-209ENST00000544301 RNF222A6NCQ9 220 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 SERPINE3A8MV23 424 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 EEF1E1-BLOC1S5C9J1V9 151 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 PATE4P0C8F1 98 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 MPLP40238 635 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 OR3A2P47893 321 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 ATXN7L3Q14CW9 347 aaPredicted RBP15.72■□□□□ 0.11
VIM-209ENST00000544301 KRTAP27-1Q3LI81 207 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 GALNTL5Q7Z4T8 443 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 PEG10Q86TG7 708 aaKnown RBP15.72■□□□□ 0.11
VIM-209ENST00000544301 SULF2Q8IWU5 870 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 CSNK2A3Q8NEV1 391 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 AKR7LQ8NHP1 331 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 SUN5Q8TC36 379 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 MAFIPQ8WZ33 124 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 WDR13Q9H1Z4 485 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 ARRDC1-AS1Q9H2J1 176 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 KCNMB2Q9Y691 235 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 FREM2Q5SZK8 3169 aa15.72■□□□□ 0.11
VIM-209ENST00000544301 SCO1O75880 301 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 CNR1P21554 472 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 FPR2P25090 351 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 SERPINF1P36955 418 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 DLSTP36957 453 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 GFRA1P56159 465 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 MTCP1P56278 107 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 TAS2R46P59540 309 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 FOXO1Q12778 655 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 AADACL3Q5VUY0 350 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 ACOT7LQ6ZUV0 252 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 TMEM17Q86X19 198 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 PDZD9Q8IXQ8 264 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 OR1S1Q8NH92 325 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 CCDC120Q96HB5 630 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 FOXB1Q99853 325 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 RTBDNQ9BSG5 229 aaPredicted RBP15.71■□□□□ 0.11
VIM-209ENST00000544301 NUP50Q9UKX7 468 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 OSGIN2Q9Y236 505 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 KANTRA0A1W2PQU2 76 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 C5orf51A6NDU8 294 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 ZSCAN5BA6NJL1 495 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 SDCBPO00560 298 aaPredicted RBP15.71■□□□□ 0.11
VIM-209ENST00000544301 BCL2L11O43521 198 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 LCATP04180 440 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 TMEM225BP0DP42 221 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 PSG4Q00888 419 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 ARL6IP1Q15041 203 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 CEACAM16Q2WEN9 425 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 THAP6Q8TBB0 222 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 SPSB1Q96BD6 273 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 SCGB3A2Q96PL1 93 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 DDA1Q9BW61 102 aa15.71■□□□□ 0.11
VIM-209ENST00000544301 PFDN2Q9UHV9 154 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms