RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-221	ENST00000543120	FAH	P16930	419 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	HTR1F	P30939	366 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	TGM4	P49221	684 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	ACTG1	P63261	375 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	EGR3	Q06889	387 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	RIPPLY1	Q0D2K3	151 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	BAMBI	Q13145	260 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	CEACAM21	Q3KPI0	293 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	ZNF684	Q5T5D7	378 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	C12orf54	Q6X4T0	127 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	MOB3C	Q70IA8	216 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	COMMD2	Q86X83	199 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	GID4	Q8IVV7	300 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	GCDH	Q92947	438 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	EME1	Q96AY2	570 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	MNT	Q99583	582 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	RBM4B	Q9BQ04	359 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	PCGF1	Q9BSM1	259 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	ABCB9	Q9NP78	766 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	WARS2	Q9UGM6	360 aa	Known RBP	13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	OR52A1	Q9UKL2	312 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	SLC22A13	Q9Y226	551 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	PIGL	Q9Y2B2	252 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120		R4GMQ9	66 aa		13.73	□□□□□ -0.21
PTPN6-221	ENST00000543120	FBN3	Q75N90	2809 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	DNAJC9-AS1	A6NH13	148 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120		A6NIN4	97 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120		E9PQ18	207 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ZNF670-ZNF695	F2Z2N8	137 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ALPL	P05186	524 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	PRTN3	P24158	256 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	CFP	P27918	469 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	COMP	P49747	757 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ARF6	P62330	175 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	RUSC1-AS1	Q66K80	236 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	STUM	Q69YW2	141 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	RBMS3	Q6XE24	437 aa	Known RBP	13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	CCDC121	Q6ZUS5	278 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ELMOD2	Q8IZ81	293 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	OR10Z1	Q8NGY1	313 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ST8SIA4	Q92187	359 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	TAF15	Q92804	592 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	C12orf43	Q96C57	262 aa	Known RBP	13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	HIST1H2AA	Q96QV6	131 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	SIRPD	Q9H106	197 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	ENOPH1	Q9UHY7	261 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	GTF2A1L	Q9UNN4	478 aa		13.72	□□□□□ -0.21
PTPN6-221	ENST00000543120	CENPVL3	A0A0U1RRI6	287 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	LOC110117498-PIK3R3	F6TDL0	507 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	P2RY10	O00398	339 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	TOX4	O94842	621 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	RPP14	O95059	124 aa	Known RBP	13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	LIPF	P07098	398 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	GNG3	P63215	75 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	IKZF1	Q13422	519 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	SLC9A3R2	Q15599	337 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	DEFB112	Q30KQ8	113 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	ZIK1	Q3SY52	487 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	THAP5	Q7Z6K1	395 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	LY6G5B	Q8NDX9	201 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	OR5A2	Q8NGI9	324 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	OR8J1	Q8NGP2	316 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	OR14K1	Q8NGZ2	314 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	ANGPTL6	Q8NI99	470 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	WDFY2	Q96P53	400 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	CNTD2	Q9H8S5	307 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	SNX5	Q9Y5X3	404 aa		13.71	□□□□□ -0.21
PTPN6-221	ENST00000543120	EI24	O14681	340 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	DHRS3	O75911	302 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	NRAS	P01111	189 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	OR2T7	P0C7T2	308 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	ATP6V1B1	P15313	513 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	DGUOK	Q16854	277 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	ODF4	Q2M2E3	257 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	BCL2L15	Q5TBC7	163 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	TMEM42	Q69YG0	159 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120		Q6ZSR3	168 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	YIPF7	Q8N8F6	280 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	PNLDC1	Q8NA58	520 aa	Known RBP	13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	OR10H4	Q8NGA5	316 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	OR2T27	Q8NH04	317 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	AQP3	Q92482	292 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	RNF166	Q96A37	237 aa	Predicted RBP	13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	GAFA1	Q96PS6	74 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	GPR173	Q9NS66	373 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	USE1	Q9NZ43	259 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	DNAJB11	Q9UBS4	358 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	AASS	Q9UDR5	926 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	ENPP5	Q9UJA9	477 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120		V9GYS6	101 aa		13.7	□□□□□ -0.22
PTPN6-221	ENST00000543120	IGKV1D-17	A0A075B6S4	117 aa		13.69	□□□□□ -0.22
PTPN6-221	ENST00000543120	METTL15	A6NJ78	407 aa		13.69	□□□□□ -0.22
PTPN6-221	ENST00000543120		H3BSH0	61 aa		13.69	□□□□□ -0.22
PTPN6-221	ENST00000543120	HAX1	O00165	279 aa		13.69	□□□□□ -0.22
PTPN6-221	ENST00000543120	NDUFB3	O43676	98 aa		13.69	□□□□□ -0.22
PTPN6-221	ENST00000543120	ENTPD6	O75354	484 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms