RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ATP5J2P56134 94 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 ACTBP60709 375 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 ACTG1P63261 375 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 GALK2Q01415 458 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 RIPPLY1Q0D2K3 151 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 CNN3Q15417 329 aaKnown RBP7.24□□□□□ -1.25
CHD4-208ENST00000540960 CEACAM16Q2WEN9 425 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 HES5Q5TA89 166 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 FBXW9Q5XUX1 488 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 CCBE1Q6UXH8 406 aaPredicted RBP7.24□□□□□ -1.25
CHD4-208ENST00000540960 FAM57BQ71RH2 274 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 LINGO2Q7L985 606 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 SSX8Q7RTT4 187 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 ADGRE4PQ86SQ3 457 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 ZNF554Q86TJ5 538 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 UBE2J2Q8N2K1 259 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 TOMM5Q8N4H5 51 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 JAGN1Q8N5M9 183 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 DUSP18Q8NEJ0 188 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 KCNG3Q8TAE7 436 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 SYNPRQ8TBG9 265 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 ABHD3Q8WU67 409 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 SMIM4Q8WVI0 70 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 CREB3L1Q96BA8 519 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 SPSB1Q96BD6 273 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 FGGYQ96C11 551 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 S100A13Q99584 98 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 USB1Q9BQ65 265 aaKnown RBP7.24□□□□□ -1.25
CHD4-208ENST00000540960 URM1Q9BTM9 101 aaKnown RBP7.24□□□□□ -1.25
CHD4-208ENST00000540960 OR2H1Q9GZK4 316 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 SHARPINQ9H0F6 387 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 CST11Q9H112 138 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 OBP2BQ9NPH6 170 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 PNRC2Q9NPJ4 139 aaKnown RBP7.24□□□□□ -1.25
CHD4-208ENST00000540960 GPR84Q9NQS5 396 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 C14orf119Q9NWQ9 140 aa7.24□□□□□ -1.25
CHD4-208ENST00000540960 TRAV8-7A0A075B6U6 113 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 A0A0G2JMP0 313 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 A0A0X1KG70 313 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 FUOMA2VDF0 154 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 SMIM30A4D0T7 59 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 LYRM1O43325 122 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 TPD52L2O43399 206 aaKnown RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 SS18L1O75177 396 aaPredicted RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 ZNF780AO75290 641 aaPredicted RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 RBBP9O75884 186 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 SNAPC5O75971 98 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 DHFRP00374 187 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 EIF4EP06730 217 aaKnown RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 CSF1P09603 554 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 PAX1P15863 534 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 AZGP1P25311 298 aaKnown RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 OR3A2P47893 321 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 HTR5AP47898 357 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 BTG1P62324 171 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 IFITM3Q01628 133 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 GLYATL3Q5SZD4 288 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 ZNF529Q6P280 563 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 GDPD3Q7L5L3 318 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 NR2C2APQ86WQ0 139 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 CMTM4Q8IZR5 234 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 RDH10Q8IZV5 341 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 LRRC18Q8N456 261 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 C1orf162Q8NEQ5 155 aaPredicted RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 SEMA6DQ8NFY4 1073 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 OR4M2Q8NGB6 313 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 OR8B12Q8NGG6 310 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 OR10S1Q8NGN2 331 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 FNDC9Q8TBE3 224 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 OR51E1Q8TCB6 317 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 CHAC2Q8WUX2 184 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 FAM46BQ96A09 425 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 ZNF845Q96IR2 970 aaPredicted RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 SDHCQ99643 169 aaPredicted RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 DPAGT1Q9H3H5 408 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 ZNF701Q9NV72 531 aaPredicted RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 TAS2R4Q9NYW5 299 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 MALT1Q9UDY8 824 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 OR5V1Q9UGF6 321 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 SLC7A11Q9UPY5 501 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 MRPS7Q9Y2R9 242 aaKnown RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 NOP16Q9Y3C1 178 aaKnown RBP7.23□□□□□ -1.25
CHD4-208ENST00000540960 LIPGQ9Y5X9 500 aa7.23□□□□□ -1.25
CHD4-208ENST00000540960 A0A1B0GTI1 187 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 GGT3PA6NGU5 568 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 FIGNL2A6NMB9 653 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 DEFB108AA8MXU0 73 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 H0YC42 278 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 EEF1E1O43324 174 aaKnown RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 SYNGR3O43761 229 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 WDR1O75083 606 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 PAHP00439 452 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 IGLV3-1P01715 115 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 LCATP04180 440 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 HNRNPCP07910 306 aaKnown RBP eCLIP7.22□□□□□ -1.25
CHD4-208ENST00000540960 HCKP08631 526 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 CELA3AP09093 270 aa7.22□□□□□ -1.25
CHD4-208ENST00000540960 TMIGD3P0DMS9 266 aaPredicted RBP7.22□□□□□ -1.25
CHD4-208ENST00000540960 ADRA2CP18825 462 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms