RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 SETD9Q8NE22 299 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 OR4M2Q8NGB6 313 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 OR8B3Q8NGG8 313 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 OR14K1Q8NGZ2 314 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 OR2G2Q8NGZ5 317 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 RPL3LQ92901 407 aaKnown RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 ITFG2Q969R8 447 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 PELI1Q96FA3 418 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 NEIL1Q96FI4 390 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 OR8B2Q96RD0 313 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 MYCBPQ99417 103 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 ALG8Q9BVK2 526 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 FGF23Q9GZV9 251 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 RNPEPL1Q9HAU8 725 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 PLEKHA1Q9HB21 404 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 FRRS1LQ9P0K9 344 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 V9GYS6 101 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 C2CD3Q4AC94 2353 aa7.72□□□□□ -1.17
SNHG1-215ENST00000540904 SONP18583 2426 aaKnown RBP7.72□□□□□ -1.17
SNHG1-215ENST00000540904 YLPM1P49750 1951 aaKnown RBP7.71□□□□□ -1.17
SNHG1-215ENST00000540904 NIPBLQ6KC79 2804 aaeCLIP7.71□□□□□ -1.172e-72■■□□□ 13.5
SNHG1-215ENST00000540904 LOC107986453A0A1B0GWG9 222 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 OOEPA6NGQ2 149 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 KIAA1324LA8MWY0 1029 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 H0YAE9 185 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 LHBP01229 141 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 GYPAP02724 150 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 HTR1AP08908 422 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 GNAO1P09471 354 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 UBCP0CG48 685 aaKnown RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 EGR1P18146 543 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 CCL1P22362 96 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 PITPNBP48739 271 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 NANOS3P60323 173 aaKnown RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 GNB2P62879 340 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 GNG3P63215 75 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 IL18R1Q13478 541 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 FAM76BQ5HYJ3 339 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 DCDC5Q6ZRR9 648 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 KRT74Q7RTS7 529 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 FAM90A1Q86YD7 464 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 C8orf59Q8N0T1 100 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 SCCPDHQ8NBX0 429 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 OR5A2Q8NGI9 324 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 SEH1LQ96EE3 360 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 SSBP3Q9BWW4 388 aaPredicted RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 TLNRD1Q9H1K6 362 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 ISG20L2Q9H9L3 353 aaKnown RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 TRIM36Q9NQ86 728 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 MMP26Q9NRE1 261 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 INPP5EQ9NRR6 644 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 GPR173Q9NS66 373 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 MRPS18AQ9NVS2 196 aaKnown RBP7.71□□□□□ -1.18
SNHG1-215ENST00000540904 ERVK13-1Q9NX77 482 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 OR5V1Q9UGF6 321 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 LRCH1Q9Y2L9 728 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 TANC2Q9HCD6 1990 aa7.71□□□□□ -1.18
SNHG1-215ENST00000540904 LOC105371242A0A075B767 164 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ANKRD61A6NGH8 418 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 OR5B21A6NL26 309 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 DHRS7CA6NNS2 312 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 SRRM5B3KS81 715 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 TRAPPC2LH3BP13 241 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 AKR7A2O43488 359 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ADAM20O43506 726 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 NDUFA2O43678 99 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 RHBDL1O75783 438 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 IFNA2P01563 188 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 GATA3P23771 443 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 CPT2P23786 658 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 CFHR2P36980 270 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ETV1P50549 477 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 MICBQ29980 383 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 TMEM244Q5VVB8 128 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 TEX36Q5VZQ5 186 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 TMEM42Q69YG0 159 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 FDX2Q6P4F2 183 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 HAGHLQ6PII5 290 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-215ENST00000540904 Q6ZSR3 168 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 SYS1Q8N2H4 156 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF676Q8N7Q3 588 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 OR5T2Q8NGG2 359 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 NPRL2Q8WTW4 380 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 NRG4Q8WWG1 115 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 TECTBQ96PL2 329 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ZNF649Q9BS31 505 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 TMPRSS13Q9BYE2 586 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 WDR13Q9H1Z4 485 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 OR51I2Q9H344 312 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 C7orf69Q9H7B7 122 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 FGF20Q9NP95 211 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ERVK-18Q9QC07 812 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 CTSZQ9UBR2 303 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 DNAJB11Q9UBS4 358 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 CLN8Q9UBY8 286 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 HSPE1-MOB4S4R3N1 261 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 ZFHX3Q15911 3703 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 MALRD1Q5VYJ5 2156 aa7.7□□□□□ -1.18
SNHG1-215ENST00000540904 PPIAL4CA0A0B4J2A2 164 aa7.69□□□□□ -1.18
SNHG1-215ENST00000540904 FAM230AA0A1W2PPH8 454 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms