RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 METTL27Q8N6F8 245 aaPredicted RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 CDRT4Q8N9R6 151 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 ZSCAN4Q8NAM6 433 aaPredicted RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 GATSQ8NAP1 163 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 M1APQ8TC57 530 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 ELOVL3Q9HB03 270 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 DNAJB11Q9UBS4 358 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 VSIG4Q9Y279 399 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 HEATR5BQ9P2D3 2071 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 A0A1B0GTH9 108 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 A0A1B0GTI1 187 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 NKX2-8O15522 239 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 SCGNO76038 276 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 RNH1P13489 461 aaKnown RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 PVRP15151 417 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 ZBTB25P24278 435 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 PNLIPRP3Q17RR3 467 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 SLC16A9Q7RTY1 509 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 FAM219AQ8IW50 185 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 SFTPA2Q8IWL1 248 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 FAM185AQ8N0U4 392 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 FAM210BQ96KR6 192 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 OR5B12Q96R08 314 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 MRPL37Q9BZE1 423 aaKnown RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 TMEM100Q9NV29 134 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 LRFN1Q9P244 771 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 C19orf25Q9UFG5 118 aaPredicted RBP7.74□□□□□ -1.17
DDB1-217ENST00000540166 OR14J1Q9UGF5 321 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 V9GYS6 101 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 ADAMTS9Q9P2N4 1935 aa7.74□□□□□ -1.17
DDB1-217ENST00000540166 VCANP13611 3396 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 FAM230AA0A1W2PPH8 454 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 ZNF727A8MUV8 499 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 TBX6O95947 436 aaPredicted RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 COX5BP10606 129 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 NANOS3P60323 173 aaKnown RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 RPS11P62280 158 aaKnown RBP eCLIP7.73□□□□□ -1.17
DDB1-217ENST00000540166 ARG2P78540 354 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 HAGHQ16775 308 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 ZNF550Q7Z398 422 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 OR2L8Q8NGY9 312 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 SMIM8Q96KF7 97 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 NDUFAF3Q9BU61 184 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 FBXL17Q9UF56 701 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 SNRPCP09234 159 aaKnown RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 CPMP14384 443 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 NID1P14543 1247 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 RPS27P42677 84 aaKnown RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 GNG10P50151 68 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 SLC26A5P58743 744 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 PRPS1P60891 318 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 TNFRSF9Q07011 255 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 GNMTQ14749 295 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 ABCA11PQ4W5N1 156 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 DPY19L2P2Q6ZN68 376 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 OR10AD1Q8NGE0 317 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 MARS2Q96GW9 593 aaKnown RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 TSSK2Q96PF2 358 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 EGLN1Q9GZT9 426 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 SLC17A5Q9NRA2 495 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 CENPMQ9NSP4 180 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 GAB2Q9UQC2 676 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 STRAPQ9Y3F4 350 aaKnown RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 A0A087WV48 116 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 A0A0J9YY10 115 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 F8VVB4 439 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 F8VWA3 439 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 CSTAP01040 98 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 ADRA2CP18825 462 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 RPS15AP62244 130 aaKnown RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 SLC35A1P78382 337 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 FAHD2BQ6P2I3 314 aaPredicted RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 TMEM182Q6ZP80 229 aaPredicted RBP7.73□□□□□ -1.17
DDB1-217ENST00000540166 SGPP2Q8IWX5 399 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 CSNK1A1LQ8N752 337 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 FAHD2AQ96GK7 314 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 OR5B2Q96R09 309 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 SOX7Q9BT81 388 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 GPR87Q9BY21 358 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 C1orf198Q9H425 327 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 RAB18Q9NP72 206 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 TUBG2Q9NRH3 451 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 OR5AC2Q9NZP5 309 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 DKKL1Q9UK85 242 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 C5orf42Q9H799 3197 aa7.73□□□□□ -1.17
DDB1-217ENST00000540166 NSA2O95478 260 aaKnown RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 CSTBP04080 98 aaKnown RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 CD1AP06126 327 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 MMP7P09237 267 aaPredicted RBP7.72□□□□□ -1.17
DDB1-217ENST00000540166 PMELP40967 661 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 RBPJQ06330 500 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 DUSP8Q13202 625 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 KIR2DS3Q14952 304 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ARHGAP11BQ3KRB8 267 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 CHRFAM7AQ494W8 412 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ABHD17BQ5VST6 288 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 FIGLAQ6QHK4 219 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 SLC35D2Q76EJ3 337 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 THNSL2Q86YJ6 484 aa7.72□□□□□ -1.17
DDB1-217ENST00000540166 ADAD2Q8NCV1 583 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms