RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 MYDGFQ969H8 173 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 ERGIC1Q969X5 290 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 SMIM19Q96E16 107 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 C18orf12Q96KH6 178 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 RTL8AQ9BWD3 113 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CDCA4Q9BXL8 241 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CHST5Q9GZS9 411 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TLNRD1Q9H1K6 362 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 Q9H521 79 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 PLEKHA1Q9HB21 404 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TRIM36Q9NQ86 728 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM106BQ9NUM4 274 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 C14orf119Q9NWQ9 140 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CHCHD3Q9NX63 227 aaKnown RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 SCN3BQ9NY72 215 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TREM2Q9NZC2 230 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 LSM2Q9Y333 95 aaKnown RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 TPRKBQ9Y3C4 175 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 WIPI2Q9Y4P8 454 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 SIRT4Q9Y6E7 314 aaPredicted RBP5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 CSPG4Q6UVK1 2322 aa5.88□□□□□ -1.47
LPCAT3-209ENST00000540060 NSD1Q96L73 2696 aaPredicted RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 TRBV2A0A0J9YWF9 115 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 ANKRD61A6NGH8 418 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 A6NIN4 97 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 OR5B21A6NL26 309 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM210A6NLX4 147 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PTGES3LE9PB15 166 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 TMEM178BH3BS89 294 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 WNT9BO14905 357 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 SMAD7O15105 426 aaKnown RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 OGG1O15527 345 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PPIHO43447 177 aaKnown RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 RGS10O43665 173 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 CYB5R3P00387 301 aaPredicted RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 NRASP01111 189 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 IGHV2-70P01814 119 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 MT-ND2P03891 347 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 INHBBP09529 407 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 FOSL1P15407 271 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF12P17014 697 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 USF1P22415 310 aaPredicted RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PMELP40967 661 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 GPM6AP51674 278 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 CDH15P55291 814 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 TAS2R43P59537 309 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 GABARAPL2P60520 117 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 KRTAP1-1Q07627 177 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 SLC3A1Q07837 685 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 MZT1Q08AG7 82 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 CEACAM21Q3KPI0 293 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 FAM76BQ5HYJ3 339 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 DMRTC1Q5HYR2 192 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 CEP78Q5JTW2 689 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 CLVS2Q5SYC1 327 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 AVPI1Q5T686 147 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PLCXD3Q63HM9 321 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 DMKNQ6E0U4 476 aaPredicted RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PRSS48Q7RTY5 328 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 C11orf53Q8IXP5 236 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF676Q8N7Q3 588 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 OR1M1Q8NGA1 313 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 OR13C3Q8NGS6 347 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PP6455Q8WZ26 134 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 C10orf35Q96D05 121 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 ADAT3Q96EY9 351 aaPredicted RBP5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 TIMD4Q96H15 378 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PGLYRP3Q96LB9 341 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 MICU1Q9BPX6 476 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PDCD1LG2Q9BQ51 273 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 MND1Q9BWT6 205 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 COMMD4Q9H0A8 199 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 FN3KRPQ9HA64 309 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 GPR173Q9NS66 373 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 UFSP2Q9NUQ7 469 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 BABAM2Q9NXR7 383 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 ERVK-18Q9QC07 812 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 BLOC1S6Q9UL45 172 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 HHLA2Q9UM44 414 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 ERGIC3Q9Y282 383 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 NPTNQ9Y639 398 aa5.87□□□□□ -1.47
LPCAT3-209ENST00000540060 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.86□□□□□ -1.473e-16■■■■■ 67.7
LPCAT3-209ENST00000540060 PQLC2LA1A4F0 135 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 LRP5LA4QPB2 252 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 A6NLC8 198 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 LRRC30A6NM36 301 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF732B4DXR9 585 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 FSTL3O95633 263 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 GRPP07492 148 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 RPSAP08865 295 aaKnown RBP5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 ZNF20P17024 532 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 IL2RGP31785 369 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 CHN2P52757 468 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 BTG1P62324 171 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 GNG3P63215 75 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 HOXA4Q00056 320 aaPredicted RBP5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 BDH1Q02338 343 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 ACSM1Q08AH1 577 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 ZMYND11Q15326 602 aa5.86□□□□□ -1.47
LPCAT3-209ENST00000540060 TBCEQ15813 527 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms