RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 B3GALT1Q9Y5Z6 326 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 V9GYS6 101 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 C5orf42Q9H799 3197 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 DHRS3O75911 302 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 GLB1P16278 677 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 LPAR6P43657 344 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 SUCLG1P53597 346 aaKnown RBP11.66□□□□□ -0.54
UBE3B-209ENST00000539584 UCP2P55851 309 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 C1orf189Q5VU69 101 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 FAM57BQ71RH2 274 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 GJC3Q8NFK1 279 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 OR51F2Q8NH61 342 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 HAS2Q92819 552 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 PGAM5Q96HS1 289 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 CHST5Q9GZS9 411 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 ARV1Q9H2C2 271 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 TMEM231Q9H6L2 316 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 STARD10Q9Y365 291 aa11.66□□□□□ -0.54
UBE3B-209ENST00000539584 TDRD6O60522 2096 aaKnown RBP11.66□□□□□ -0.54
UBE3B-209ENST00000539584 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-209ENST00000539584 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-209ENST00000539584 PMS2P1A4D2B8 440 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 CRYM-AS1A6NIL9 109 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 FAM157AC9JC47 383 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 E5RGE8 158 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 RER1O15258 196 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 EFNA2O43921 213 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 HEXBP07686 556 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 SFTPBP07988 381 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 HOXB5P09067 269 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 QDPRP09417 244 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 PTAFRP25105 342 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 NXPH1P58417 271 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 GPR157Q5UAW9 335 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 POC1BQ8TC44 478 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.54
UBE3B-209ENST00000539584 NUDT22Q9BRQ3 303 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF319Q9P2F9 582 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 NSG2Q9Y328 171 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 BORCS7-ASMTA0A0B4J1R7 106 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 AQP7P3A6NL99 342 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 HTR3BO95264 441 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 MT-ND4LP03901 98 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 SERPINA5P05154 406 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 HPNP05981 417 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 CYC1P08574 325 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 SMIM6P0DI80 62 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 PI3P19957 117 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 FCGR2CP31995 323 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 SLC35A1P78382 337 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF561Q8N587 486 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 GALNT14Q96FL9 552 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 SLC7A5P2Q9GIP4 190 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 CACFD1Q9UGQ2 172 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 HSF4Q9ULV5 492 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 FAM96BQ9Y3D0 163 aa11.65□□□□□ -0.54
UBE3B-209ENST00000539584 A0A1W2PP11 408 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 C2orf72A6NCS6 295 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 PIAS2O75928 621 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 ZFAND5O76080 213 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 KNG1P01042 644 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 MSR1P21757 451 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 DTYMKP23919 212 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 CD80P33681 288 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 PTGER4P35408 488 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 CFHR1Q03591 330 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 MFAP5Q13361 173 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SMAD4Q13485 552 aaKnown RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 C10orf128Q5T292 105 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 Q6ZRG5 221 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 Q6ZS52 159 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 FOXL2NBQ6ZUU3 175 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 RTN4RL2Q86UN3 420 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SMRP1Q8NCR6 262 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SEMA6DQ8NFY4 1073 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 LILRB1Q8NHL6 650 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SLC22A8Q8TCC7 542 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 WNT2BQ93097 391 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SHDQ96IW2 340 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 CMSS1Q9BQ75 279 aaKnown RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 NELFAQ9H3P2 528 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 ZNF160Q9HCG1 818 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 TRANK1O15050 2925 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 STMND1H3BQB6 276 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SDCBPO00560 298 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 VAMP5O95183 116 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 F12P00748 615 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-209ENST00000539584 SLC2A1P11166 492 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 NME2P22392 152 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 CDAP32320 146 aa11.64□□□□□ -0.55
UBE3B-209ENST00000539584 TMEM33P57088 247 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms