RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 ROM1Q03395 351 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 PTGES3Q15185 160 aaKnown RBP18.31■□□□□ 0.52
SCARB1-206ENST00000539320 LRRC10Q5BKY1 277 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 FAM76BQ5HYJ3 339 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 ATPAF1Q5TC12 328 aaPredicted RBP18.31■□□□□ 0.52
SCARB1-206ENST00000539320 VMO1Q7Z5L0 202 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF679Q8IYX0 411 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 LY6G5BQ8NDX9 201 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 ITFG2Q969R8 447 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 OR8B4Q96RC9 309 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 PBOV1Q9GZY1 135 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 IKZF2Q9UKS7 526 aa18.31■□□□□ 0.52
SCARB1-206ENST00000539320 A0A1B0GVI7 797 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 FAM181BA6NEQ2 426 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 AKR7A2O43488 359 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF254O75437 659 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 ATP6V1B1P15313 513 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 GPM6AP51674 278 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 GNG3P63215 75 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 ATP6AP1Q15904 470 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 PRR31Q5SQ13 230 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 FIP1L1Q6UN15 594 aaKnown RBP18.3■□□□□ 0.52
SCARB1-206ENST00000539320 KRT74Q7RTS7 529 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 CMTM4Q8IZR5 234 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 KIR3DL3Q8N743 410 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 OR5T2Q8NGG2 359 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 SSMEM1Q8WWF3 244 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 DMRTB1Q96MA1 342 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 GAFA1Q96PS6 74 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 DCTN5Q9BTE1 182 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 CHIAQ9BZP6 476 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 GPR84Q9NQS5 396 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 KRT84Q9NSB2 600 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 NUFIP1Q9UHK0 495 aaKnown RBP18.3■□□□□ 0.52
SCARB1-206ENST00000539320 POMT1Q9Y6A1 747 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 TRRAPQ9Y4A5 3859 aa18.3■□□□□ 0.52
SCARB1-206ENST00000539320 M0R129 80 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 MITFO75030 526 aaPredicted RBP18.29■□□□□ 0.52
SCARB1-206ENST00000539320 OMGP23515 440 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 BNIP1Q12981 228 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF788Q6ZQV5 615 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 THAP5Q7Z6K1 395 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 C8orf46Q8TAG6 207 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 NLKQ9UBE8 527 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 MMP24Q9Y5R2 645 aa18.29■□□□□ 0.52
SCARB1-206ENST00000539320 A0A0U1RQK1 487 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 SLC22A31A6NKX4 558 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 OR5B21A6NL26 309 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF732B4DXR9 585 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 IGLV3-1P01715 115 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 CRYBA1P05813 215 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 GLRA1P23415 457 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 RAG2P55895 527 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 MFGE8Q08431 387 aaPredicted RBP18.28■□□□□ 0.52
SCARB1-206ENST00000539320 RIPPLY1Q0D2K3 151 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 CEP78Q5JTW2 689 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 ZBTB37Q5TC79 503 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 SLX4IPQ5VYV7 408 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 MEPCEQ7L2J0 689 aaKnown RBP18.28■□□□□ 0.52
SCARB1-206ENST00000539320 BCDIN3DQ7Z5W3 292 aaKnown RBP18.28■□□□□ 0.52
SCARB1-206ENST00000539320 LDLRAD3Q86YD5 345 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 PDZD9Q8IXQ8 264 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 ANGPTL6Q8NI99 470 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 OR51E1Q8TCB6 317 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 H1FXQ92522 213 aaKnown RBP18.28■□□□□ 0.52
SCARB1-206ENST00000539320 GABARAPL1Q9H0R8 117 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 SLITRK2Q9H156 845 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 OR51I2Q9H344 312 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF696Q9H7X3 374 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 MOB1AQ9H8S9 216 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 SIRT7Q9NRC8 400 aa18.28■□□□□ 0.52
SCARB1-206ENST00000539320 SLC25A10Q9UBX3 287 aaPredicted RBP18.28■□□□□ 0.52
SCARB1-206ENST00000539320 A0A1B0GUS0 222 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 ZAR1LA6NP61 321 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 SIGLEC5O15389 551 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 RHBDL1O75783 438 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 FAHP16930 419 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 DGUOKQ16854 277 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 CEACAM21Q3KPI0 293 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 NXNL2Q5VZ03 156 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 PLCXD3Q63HM9 321 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 C12orf73Q69YU5 71 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 ZNF322Q6U7Q0 402 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-206ENST00000539320 METAP1DQ6UB28 335 aaPredicted RBP18.27■□□□□ 0.52
SCARB1-206ENST00000539320 SLC35F2Q8IXU6 374 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 TCEANCQ8N8B7 351 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 OR4F5Q8NH21 305 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 TBC1D15Q8TC07 691 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 TMEM163Q8TC26 289 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 MED30Q96HR3 178 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 MNTQ99583 582 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 ENPP5Q9UJA9 477 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 GTF2A1LQ9UNN4 478 aa18.27■□□□□ 0.52
SCARB1-206ENST00000539320 OR2AT4A6NND4 320 aa18.26■□□□□ 0.51
SCARB1-206ENST00000539320 LOC110117498-PIK3R3F6TDL0 507 aa18.26■□□□□ 0.51
SCARB1-206ENST00000539320 G3V2T6 193 aa18.26■□□□□ 0.51
SCARB1-206ENST00000539320 DHRS3O75911 302 aa18.26■□□□□ 0.51
SCARB1-206ENST00000539320 NDUFA7O95182 113 aa18.26■□□□□ 0.51
SCARB1-206ENST00000539320 TFF1P04155 84 aa18.26■□□□□ 0.51
SCARB1-206ENST00000539320 FASP25445 335 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms