RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PEX14O75381 377 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 CEACAM4O75871 244 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 RAB3DO95716 219 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 IGKV1D-12P01611 117 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 RAB6AP20340 208 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 WNT5AP41221 380 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 ERVS71-1P61550 626 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 SNRPD2P62316 118 aaKnown RBP12.21□□□□□ -0.45
ACTN1-205ENST00000538545 ZNF169Q14929 603 aaPredicted RBP12.21□□□□□ -0.45
ACTN1-205ENST00000538545 PLCXD3Q63HM9 321 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 FGD2Q7Z6J4 655 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 PNLDC1Q8NA58 520 aaKnown RBP12.21□□□□□ -0.45
ACTN1-205ENST00000538545 OR1K1Q8NGR3 316 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 PP6455Q8WZ26 134 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 SLC6A7Q99884 636 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 PRDM14Q9GZV8 571 aa12.21□□□□□ -0.45
ACTN1-205ENST00000538545 C7orf66A4D0T2 115 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 ICMTO60725 284 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 TOXO94900 526 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 AGFG2O95081 481 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 HTR3BO95264 441 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 CYB5AP00167 134 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 CSF1P09603 554 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 AKAIN1P0CW23 69 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 ZP1P60852 638 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 MRPS15P82914 257 aaKnown RBP12.21□□□□□ -0.46
ACTN1-205ENST00000538545 TAF9Q16594 264 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 PLEKHN1Q494U1 663 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-205ENST00000538545 Q5BKY6 102 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 NKAPLQ5M9Q1 402 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 C6orf201Q7Z4U5 140 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 RAB3CQ96E17 227 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 C7orf50Q9BRJ6 194 aaKnown RBP12.21□□□□□ -0.46
ACTN1-205ENST00000538545 C1QTNF5Q9BXJ0 243 aa12.21□□□□□ -0.46
ACTN1-205ENST00000538545 FGF23Q9GZV9 251 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF71Q9NQZ8 489 aaPredicted RBP12.21□□□□□ -0.46
ACTN1-205ENST00000538545 PMP2P02689 132 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 BLVRBP30043 206 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 IDH3GP51553 393 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 TFAP2EQ6VUC0 442 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 RFPL4BQ6ZWI9 263 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 RBMXL3Q8N7X1 1067 aaKnown RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF486Q96H40 463 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 POM121L2Q96KW2 1035 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 PAPOLGQ9BWT3 736 aaKnown RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 CHIAQ9BZP6 476 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 FABP7O15540 132 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 NDUFB6O95139 128 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF205O95201 554 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 SFTPBP07988 381 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 MPGP29372 298 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 HRH1P35367 487 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 KIR2DL2P43627 348 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 IFITM2Q01629 132 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 SF3B4Q15427 424 aaKnown RBP eCLIP12.2□□□□□ -0.461e-25■■■■■ 49.5
ACTN1-205ENST00000538545 PIGYQ3MUY2 71 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 IDO2Q6ZQW0 420 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 ZBTB8BQ8NAP8 495 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 BCL2L2Q92843 193 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-205ENST00000538545 BORCS8Q96FH0 119 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 S100A13Q99584 98 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 CA10Q9NS85 328 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF69Q9UC07 566 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 SHANK1Q9Y566 2161 aa12.2□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF736B4DX44 427 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-205ENST00000538545 NAT2P11245 290 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 OR3A2P47893 321 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 NHLH1Q02575 133 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 C2orf68Q2NKX9 166 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 SNAPC3Q92966 411 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 PTX4Q96A99 478 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 GMPPAQ96IJ6 420 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-205ENST00000538545 COPZ2Q9P299 210 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 DKK4Q9UBT3 224 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 FAM221AA4D161 298 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 SIX6O95475 246 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 NPBWR2P48146 333 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 FAM214BQ7L5A3 538 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 NOXA1Q86UR1 476 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 BPIFB2Q8N4F0 458 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 EXTL1Q92935 676 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 ST6GALNAC5Q9BVH7 336 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 F8VVB4 439 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 F8VWA3 439 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 AKR7A2O43488 359 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 ZNF735P0CB33 412 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 GNG2P59768 71 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 RPS27AP62979 156 aaKnown RBP12.19□□□□□ -0.46
ACTN1-205ENST00000538545 CLVS2Q5SYC1 327 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 COLCA1Q6ZS62 124 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 Q6ZSR3 168 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 SEM1Q6ZVN7 128 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 ABHD17AQ96GS6 310 aa12.19□□□□□ -0.46
ACTN1-205ENST00000538545 OPN3Q9H1Y3 402 aaPredicted RBP12.19□□□□□ -0.46
ACTN1-205ENST00000538545 RABL2AQ9UBK7 228 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms