RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 SLC25A44Q96H78 314 aaPredicted RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 SMIM10Q96HG1 83 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 FAM210BQ96KR6 192 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 IMMP2LQ96T52 175 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 P2RX4Q99571 388 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 CMKLR1Q99788 373 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 PYGO2Q9BRQ0 406 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 TIMM29Q9BSF4 260 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 GPR87Q9BY21 358 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 C5orf66Q9H5L9 145 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 DECR2Q9NUI1 292 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 GRHPRQ9UBQ7 328 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 C14orf166Q9Y224 244 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 OSGIN2Q9Y236 505 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 HEBP2Q9Y5Z4 205 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 COLEC10Q9Y6Z7 277 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 CACNA1IQ9P0X4 2223 aa5.92□□□□□ -1.46
USP28-207ENST00000538475 PHF3Q92576 2039 aaKnown RBP5.92□□□□□ -1.46
USP28-207ENST00000538475 LOC100509620A0A075B734 347 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CCL15-CCL14A0A0B4J2E2 113 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 GLOD5A6NK44 160 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 TMEM14DPA8MWL7 114 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 HSD17B6O14756 317 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 PHOX2AO14813 284 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 AGPAT2O15120 278 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 B3GALT2O43825 422 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CDC14BO60729 498 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CYTIPO60759 359 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 PQBP1O60828 265 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 CYB5R3P00387 301 aaPredicted RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 PRH1P02810 166 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CKMP06732 381 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CTSDP07339 412 aaPredicted RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 NGFRP08138 427 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ASAH2BP0C7U1 165 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 RD3LP0DJH9 198 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 C8orf89P0DMQ9 161 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CKBP12277 381 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CEACAM1P13688 526 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 AKR1C3P42330 323 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 NOVA1P51513 510 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 TDGF1P3P51864 188 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CLDN6P56747 220 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 SUPT4H1P63272 117 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 TLE4Q04727 773 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ZNF616Q08AN1 781 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 EIF2B1Q14232 305 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 ZNF74Q16587 644 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CCL15Q16663 113 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 IAH1Q2TAA2 248 aaPredicted RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 DEFB115Q30KQ5 88 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ACOT6Q3I5F7 207 aaPredicted RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 FBLN7Q53RD9 439 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ALG10Q5BKT4 473 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 AGBL4Q5VU57 503 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 WBP2NLQ6ICG8 309 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 FBXW12Q6X9E4 464 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ERN2Q76MJ5 926 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 ZNF429Q86V71 674 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 PPP1R3BQ86XI6 285 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ZNF664Q8N3J9 261 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 PCSK9Q8NBP7 692 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 APCDD1LQ8NCL9 501 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ADPRHL1Q8NDY3 354 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CCDC54Q8NEL0 328 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 NOXO1Q8NFA2 376 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 VN1R2Q8NFZ6 395 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR10A7Q8NGE5 316 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR51L1Q8NGJ5 315 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR6N2Q8NGY6 317 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR1P1Q8NH06 330 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 KCNG3Q8TAE7 436 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ZNRF4Q8WWF5 429 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 SUSD6Q92537 303 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 SLC22A18Q96BI1 424 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CTHRC1Q96CG8 243 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 MVB12AQ96EY5 273 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR10C1Q96KK4 312 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ZNF385AQ96PM9 386 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 OR2M4Q96R27 311 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 LMF1Q96S06 567 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 RTBDNQ9BSG5 229 aaPredicted RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 SUCNR1Q9BXA5 334 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 TTTY10Q9BZA0 68 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 S1PR5Q9H228 398 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR51B6Q9H340 312 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 GAL3ST2Q9H3Q3 398 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CNTD2Q9H8S5 307 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 ELOVL3Q9HB03 270 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 CHST11Q9NPF2 352 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 MYOTQ9UBF9 498 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 OR14J1Q9UGF5 321 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 RNF150Q9ULK6 438 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 KLHDC2Q9Y2U9 406 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 MRPS18CQ9Y3D5 142 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 RHBDD3Q9Y3P4 386 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 MRPS18BQ9Y676 258 aaKnown RBP5.91□□□□□ -1.46
USP28-207ENST00000538475 R4GMQ9 66 aa5.91□□□□□ -1.46
USP28-207ENST00000538475 COL5A1P20908 1838 aaPredicted RBP5.9□□□□□ -1.46
USP28-207ENST00000538475 ATG2AQ2TAZ0 1938 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms