RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DHHO43323 396 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 ACTL6AO96019 429 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 CD63P08962 238 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 HOXB5P09067 269 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 CCL3P10147 92 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 CD79AP11912 226 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 CHRFAM7AQ494W8 412 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 DRAM2Q6UX65 266 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 CLRN3Q8NCR9 226 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 OR51F2Q8NH61 342 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 SAP25Q8TEE9 199 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 PP6455Q8WZ26 134 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 HAS2Q92819 552 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 C2orf50Q96LR7 162 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 TSNAXQ99598 290 aaKnown RBP12.55□□□□□ -0.4
USP44-203ENST00000537435 TM2D1Q9BX74 207 aa12.55□□□□□ -0.4
USP44-203ENST00000537435 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
USP44-203ENST00000537435 G3V3Y1 287 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 M0R135 149 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 GPR31O00270 319 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 ABCD4O14678 606 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 KNG1P01042 644 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 CPT2P23786 658 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 FOXL2NBQ6ZUU3 175 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 SLC16A14Q7RTX9 510 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 POC1AQ8NBT0 407 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 RHBDD1Q8TEB9 315 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
USP44-203ENST00000537435 ZNF799Q96GE5 643 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 JSRP1Q96MG2 331 aaPredicted RBP12.54□□□□□ -0.4
USP44-203ENST00000537435 NECAB3Q96P71 396 aaPredicted RBP12.54□□□□□ -0.4
USP44-203ENST00000537435 PLEK2Q9NYT0 353 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 IGKV1D-8A0A087WSZ0 117 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 LOC102723996A0A087X1L8 192 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 ADCYAP1P18509 176 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 CCDC157Q569K6 752 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 LYSMD4Q5XG99 296 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 OPN5Q6U736 354 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 GALNTL5Q7Z4T8 443 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 C6orf201Q7Z4U5 140 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 TMEM123Q8N131 208 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 ARL11Q969Q4 196 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 AQP10Q96PS8 301 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 PIGQQ9BRB3 760 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 OR2S2Q9NQN1 319 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 CACNA1EQ15878 2313 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 RTTNQ86VV8 2226 aa12.54□□□□□ -0.4
USP44-203ENST00000537435 IGHV1-45A0A0A0MS14 117 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 FIGNL2A6NMB9 653 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 EIF1BO60739 113 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 CYC1P08574 325 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 FAM157CP0CG43 387 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 GABRR1P24046 479 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 ZNF133P52736 654 aaPredicted RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 S100A10P60903 97 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 HIST1H3AP68431 136 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 SRSF3P84103 164 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 SNAI3Q3KNW1 292 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 PLEKHN1Q494U1 663 aaPredicted RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 HIST2H3AQ71DI3 136 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 PUSL1Q8N0Z8 303 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 PROK2Q9HC23 129 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 MCTS1Q9ULC4 181 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 ZIC3O60481 467 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 MTRF1O75570 445 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 VAMP5O95183 116 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 CSTBP04080 98 aaKnown RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 LIFP15018 202 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 PTGER4P35408 488 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 DSCR4P56555 118 aaPredicted RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 IL15RAQ13261 267 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 STK11Q15831 433 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 GUCA2BQ16661 112 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 NSUN5P2Q63ZY6 315 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 CLDN23Q96B33 292 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 ZNF837Q96EG3 531 aaPredicted RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 NAA11Q9BSU3 229 aaPredicted RBP12.53□□□□□ -0.4
USP44-203ENST00000537435 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 ULBP2Q9BZM5 246 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 WDR54Q9H977 334 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 ACKR4Q9NPB9 350 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 GPR173Q9NS66 373 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 PLEKHJ1Q9NW61 149 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 DKKL1Q9UK85 242 aa12.53□□□□□ -0.4
USP44-203ENST00000537435 EML6Q6ZMW3 1958 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 SERPINA5P05154 406 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 UMODP07911 640 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 SFTPBP07988 381 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 PET100P0DJ07 73 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 ICAM2P13598 275 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 ARL6IP1Q15041 203 aa12.52□□□□□ -0.4
USP44-203ENST00000537435 SURF2Q15527 256 aaPredicted RBP12.52□□□□□ -0.4
USP44-203ENST00000537435 PABPC1L2AQ5JQF8 200 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms