RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 DHRS7CA6NNS2 312 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 POM121CA8CG34 1229 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 SRRM5B3KS81 715 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
PRKDC-207ENST00000536483 CLDN34H7C241 214 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF205O95201 554 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 MRPL3P09001 348 aaKnown RBP10.33□□□□□ -0.76
PRKDC-207ENST00000536483 OR2T7P0C7T2 308 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 MUC1P15941 1255 aaPredicted RBP10.33□□□□□ -0.76
PRKDC-207ENST00000536483 GNALP38405 381 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 MAP2K3P46734 347 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 PITPNBP48739 271 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ALDH3A2P51648 485 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 AQP4P55087 323 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 CXCR4P61073 352 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 SNRPGP62308 76 aaKnown RBP10.33□□□□□ -0.76
PRKDC-207ENST00000536483 PDLIM3Q53GG5 364 aaPredicted RBP10.33□□□□□ -0.76
PRKDC-207ENST00000536483 TMEM42Q69YG0 159 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 LYPD2Q6UXB3 125 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 C9orf139Q6ZV77 190 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 EGFL6Q8IUX8 553 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 SLC35F2Q8IXU6 374 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ELMOD2Q8IZ81 293 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 OR2T27Q8NH04 317 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 RFKQ969G6 155 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 UPRTQ96BW1 309 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 PPP1R3EQ9H7J1 279 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 BRD7Q9NPI1 651 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 CLN8Q9UBY8 286 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 MRM2Q9UI43 246 aaKnown RBP10.33□□□□□ -0.76
PRKDC-207ENST00000536483 R4GMQ9 66 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 TGP01266 2768 aa10.33□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF816-ZNF321PA0A0X1KG74 233 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 SAC3D1A6NKF1 404 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF670-ZNF695F2Z2N8 137 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 M0R129 80 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 SULT1C4O75897 302 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 TTRP02766 147 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 LIPFP07098 398 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 GRPP07492 148 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 MDKP21741 143 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-207ENST00000536483 CCL1P22362 96 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 MTNR1AP48039 350 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 CDC42P60953 191 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 ISL1P61371 349 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 GNB2P62879 340 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 RIPPLY1Q0D2K3 151 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 PRDX4Q13162 271 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 OCLNQ16625 522 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 LRRC36Q1X8D7 754 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 CEACAM21Q3KPI0 293 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 CD276Q5ZPR3 534 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 BTNL3Q6UXE8 466 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF826PQ6ZT77 177 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 FAM90A1Q86YD7 464 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 OR5A2Q8NGI9 324 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 HPSE2Q8WWQ2 592 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 RDH12Q96NR8 316 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 RTL8AQ9BWD3 113 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 PAPOLGQ9BWT3 736 aaKnown RBP10.32□□□□□ -0.76
PRKDC-207ENST00000536483 FGF23Q9GZV9 251 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-207ENST00000536483 DNTTIP1Q9H147 329 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 SLITRK2Q9H156 845 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
PRKDC-207ENST00000536483 A0A1B0GTI1 187 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 MDFIC2A0A1B0GVS7 189 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 ZNF850A8MQ14 1090 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 J3QRE1 110 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 PSMD9O00233 223 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 EI24O14681 340 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 GPR37O15354 613 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 DHRS3O75911 302 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 ECDO95905 644 aaPredicted RBP10.31□□□□□ -0.76
PRKDC-207ENST00000536483 PLATP00750 562 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 OMGP23515 440 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 TGM4P49221 684 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 BPIFB3P59826 476 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 MICBQ29980 383 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 GFOD2Q3B7J2 385 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 MEDAGQ5VYS4 303 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 C16orf87Q6PH81 154 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 ZDHHC23Q8IYP9 409 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 CCDC54Q8NEL0 328 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 OR51G2Q8NGK0 314 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 TMIGD2Q96BF3 282 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 APOL4Q9BPW4 351 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 RIBC2Q9H4K1 309 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 PRDM13Q9H4Q3 707 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 GPR84Q9NQS5 396 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 ERVK-18Q9QC07 812 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 SNX5Q9Y5X3 404 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 V9GYS6 101 aa10.31□□□□□ -0.76
PRKDC-207ENST00000536483 TRAV40A0A0B4J280 105 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 A0A1W2PQL4 384 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-207ENST00000536483 METTL15A6NJ78 407 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 OR5B21A6NL26 309 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 A6NLC8 198 aa10.3□□□□□ -0.76
PRKDC-207ENST00000536483 C22orf46C9J442 243 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms