RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 PGM2L1Q6PCE3 622 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 DLEU7Q6UYE1 221 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 LCNL1Q6ZST4 164 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 TMPRSS11FQ6ZWK6 438 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 DHDDSQ86SQ9 333 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 PATL1Q86TB9 770 aaKnown RBP6.5□□□□□ -1.37
CLIP1-206ENST00000535290 SATL1Q86VE3 508 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 FUNDC1Q8IVP5 155 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 OR6V1Q8N148 313 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CYB561A3Q8NBI2 242 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 FAM156AQ8NDB6 213 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 OR13D1Q8NGV5 346 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 OR2T27Q8NH04 317 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 OR4Q3Q8NH05 313 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 SLC26A7Q8TE54 656 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CAPSLQ8WWF8 208 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 SDSLQ96GA7 329 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 RBM14Q96PK6 669 aaKnown RBP6.5□□□□□ -1.37
CLIP1-206ENST00000535290 OR52B2Q96RD2 323 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 FGF23Q9GZV9 251 aaPredicted RBP6.5□□□□□ -1.37
CLIP1-206ENST00000535290 DCLRE1BQ9H816 532 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CYB5R1Q9UHQ9 305 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 LINC00527Q9UJ94 153 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 CORO2BQ9UQ03 480 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 RHBDD3Q9Y3P4 386 aa6.5□□□□□ -1.37
CLIP1-206ENST00000535290 ABCA13Q86UQ4 5058 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 HTR3EA5X5Y0 456 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 SOCS2O14508 198 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 SLC25A17O43808 307 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 PTP4A3O75365 173 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 OR2F2O95006 317 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 LY6G6CO95867 125 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 IGHV1-8P0DP01 117 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 PIPP12273 146 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-206ENST00000535290 GLRA1P23415 457 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 OTX1P32242 354 aaPredicted RBP6.49□□□□□ -1.37
CLIP1-206ENST00000535290 GNALP38405 381 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 DDOSTP39656 456 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 GPR4P46093 362 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 FAM3AP98173 230 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 PRKCDQ05655 676 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 NFYCQ13952 458 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 KRT72Q14CN4 511 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 MINOS1Q5TGZ0 78 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 AGBL2Q5U5Z8 902 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 SLC16A9Q7RTY1 509 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 THAP5Q7Z6K1 395 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 CPLX4Q7Z7G2 160 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 CD177Q8N6Q3 437 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 OR2AJ1Q8NGZ0 328 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 NDNFQ8TB73 568 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 SPTSSAQ969W0 71 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 SPSB4Q96A44 273 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 RNFT2Q96EX2 444 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 POLR2J2Q9GZM3 115 aaKnown RBP6.49□□□□□ -1.37
CLIP1-206ENST00000535290 POLR2J3Q9H1A7 115 aaKnown RBP6.49□□□□□ -1.37
CLIP1-206ENST00000535290 TBC1D23Q9NUY8 699 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 LGALS13Q9UHV8 139 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 A4GNTQ9UNA3 340 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 B9D1Q9UPM9 204 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 MINOS1-NBL1R4GNA1 71 aa6.49□□□□□ -1.37
CLIP1-206ENST00000535290 hCG_2014768A0A024R1R8 64 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 GHRHP01286 108 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 SPNP16150 400 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF823P16415 610 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 CRABP1P29762 137 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 DCTDP32321 178 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 RPS27P42677 84 aaKnown RBP6.48□□□□□ -1.37
CLIP1-206ENST00000535290 PRKXP51817 358 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 MTPNP58546 118 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 KIR2DS1Q14954 304 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 ZBED5Q49AG3 693 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 FAM76BQ5HYJ3 339 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 FAM27D1Q5T7N8 215 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 GPR139Q6DWJ6 353 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 LCN8Q6JVE9 175 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 TBPL2Q6SJ96 375 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 DRAM2Q6UX65 266 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 CALHM1Q8IU99 346 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 LINC00471Q8N535 108 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 RPP25LQ8N5L8 163 aaKnown RBP6.48□□□□□ -1.37
CLIP1-206ENST00000535290 MNS1Q8NEH6 495 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 OR8U1Q8NH10 309 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 CHPT1Q8WUD6 406 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 STMN2Q93045 179 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 SGK3Q96BR1 496 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 SPDL1Q96EA4 605 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 MICU1Q9BPX6 476 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 PAPOLGQ9BWT3 736 aaKnown RBP6.48□□□□□ -1.37
CLIP1-206ENST00000535290 NRIP3Q9NQ35 241 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 RHCGQ9UBD6 479 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 IER3IP1Q9Y5U9 82 aa6.48□□□□□ -1.37
CLIP1-206ENST00000535290 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
CLIP1-206ENST00000535290 RFPL4AA6NLU0 287 aa6.47□□□□□ -1.37
CLIP1-206ENST00000535290 ANXA2P2A6NMY6 339 aa6.47□□□□□ -1.37
CLIP1-206ENST00000535290 RFPL4AL1F8VTS6 287 aa6.47□□□□□ -1.37
CLIP1-206ENST00000535290 SLC22A2O15244 555 aa6.47□□□□□ -1.37
CLIP1-206ENST00000535290 MTRF1O75570 445 aaKnown RBP6.47□□□□□ -1.37
CLIP1-206ENST00000535290 ZNF728P0DKX0 622 aa6.47□□□□□ -1.37
CLIP1-206ENST00000535290 IGHV4-30-4P0DP06 118 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms