RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PELI1Q96FA3 418 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 NEIL1Q96FI4 390 aaPredicted RBP17.08■□□□□ 0.32
CCS-208ENST00000533244 HIST1H2AAQ96QV6 131 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 ALG8Q9BVK2 526 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 TMPRSS13Q9BYE2 586 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 FGF20Q9NP95 211 aaPredicted RBP17.08■□□□□ 0.32
CCS-208ENST00000533244 TRIM36Q9NQ86 728 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 ERVK13-1Q9NX77 482 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 HSPE1-MOB4S4R3N1 261 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 WNK2Q9Y3S1 2297 aa17.08■□□□□ 0.32
CCS-208ENST00000533244 A0A0G2JMP0 313 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 A0A0X1KG70 313 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 OR5B21A6NL26 309 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 SRRM5B3KS81 715 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.07■□□□□ 0.32
CCS-208ENST00000533244 J3QLI3 93 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 UBCP0CG48 685 aaKnown RBP17.07■□□□□ 0.32
CCS-208ENST00000533244 SRD5A1P18405 259 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 CAPGP40121 348 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 NANOS3P60323 173 aaKnown RBP17.07■□□□□ 0.32
CCS-208ENST00000533244 GNG3P63215 75 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 KCNJ8Q15842 424 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 ESCO2Q56NI9 601 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 CEP78Q5JTW2 689 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 CLVS2Q5SYC1 327 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 LYPD2Q6UXB3 125 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 LHFPL3Q86UP9 236 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 SCCPDHQ8NBX0 429 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 DEFB108BQ8NET1 73 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 OR4M2Q8NGB6 313 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 RPL3LQ92901 407 aaKnown RBP17.07■□□□□ 0.32
CCS-208ENST00000533244 MRPL48Q96GC5 212 aaKnown RBP17.07■□□□□ 0.32
CCS-208ENST00000533244 C4orf36Q96KX1 117 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 MYCBPQ99417 103 aaPredicted RBP17.07■□□□□ 0.32
CCS-208ENST00000533244 OR51I2Q9H344 312 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 FRRS1LQ9P0K9 344 aa17.07■□□□□ 0.32
CCS-208ENST00000533244 TRAV38-1A0A0B4J264 116 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 A0A1B0GVI7 797 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 C3orf80F5H4A9 247 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 NRASP01111 189 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 GPM6AP51674 278 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 CCR9P51686 369 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 PAX2Q02962 417 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 ODF4Q2M2E3 257 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 DCAF12L2Q5VW00 463 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 PLCXD3Q63HM9 321 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 SFRP4Q6FHJ7 346 aaPredicted RBP17.06■□□□□ 0.32
CCS-208ENST00000533244 ZNF841Q6ZN19 808 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 C1orf229Q6ZS94 237 aaPredicted RBP17.06■□□□□ 0.32
CCS-208ENST00000533244 MOB3CQ70IA8 216 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 FAM90A1Q86YD7 464 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 BOLLQ8N9W6 283 aaKnown RBP17.06■□□□□ 0.32
CCS-208ENST00000533244 OR8B3Q8NGG8 313 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 OR8B2Q96RD0 313 aa17.06■□□□□ 0.32
CCS-208ENST00000533244 SSBP3Q9BWW4 388 aaPredicted RBP17.06■□□□□ 0.32
CCS-208ENST00000533244 LOC107986453A0A1B0GWG9 222 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 ZNF732B4DXR9 585 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 TRAPPC2LH3BP13 241 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 J3QLW9 94 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 PHF1O43189 567 aaPredicted RBP17.05■□□□□ 0.32
CCS-208ENST00000533244 SYT7O43581 403 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 NDUFA2O43678 99 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 AVPP01185 164 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 ISG15P05161 165 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 GNAO1P09471 354 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 LIMS3P0CW19 117 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 LIMS4P0CW20 117 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 ZNF19P17023 458 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 FAHD2BQ6P2I3 314 aaPredicted RBP17.05■□□□□ 0.32
CCS-208ENST00000533244 KCTD8Q6ZWB6 473 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 NLRC3Q7RTR2 1065 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 FBLIM1Q8WUP2 373 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 DACT3Q96B18 629 aaPredicted RBP17.05■□□□□ 0.32
CCS-208ENST00000533244 FAHD2AQ96GK7 314 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 VCXQ9H320 206 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 ISG20L2Q9H9L3 353 aaKnown RBP17.05■□□□□ 0.32
CCS-208ENST00000533244 MMP26Q9NRE1 261 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 CTSZQ9UBR2 303 aa17.05■□□□□ 0.32
CCS-208ENST00000533244 HTR1AP08908 422 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 MUC1P15941 1255 aaPredicted RBP17.04■□□□□ 0.32
CCS-208ENST00000533244 ZNF12P17014 697 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 PITPNBP48739 271 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 DMRTC1Q5HYR2 192 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 TMEM244Q5VVB8 128 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 NRG4Q8WWG1 115 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 C10orf35Q96D05 121 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 GPR173Q9NS66 373 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 ATRQ13535 2644 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 DOCK11Q5JSL3 2073 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 OR4C45A6NMZ5 311 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 DCKP27707 260 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 GNB2P62879 340 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 WDR25Q64LD2 544 aaPredicted RBP17.04■□□□□ 0.32
CCS-208ENST00000533244 LAIR2Q6ISS4 152 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 RDH10Q8IZV5 341 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 C8orf59Q8N0T1 100 aaPredicted RBP17.04■□□□□ 0.32
CCS-208ENST00000533244 TFAP2CQ92754 450 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 C12orf43Q96C57 262 aaKnown RBP17.04■□□□□ 0.32
CCS-208ENST00000533244 KAAG1Q9UBP8 84 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 OPN4Q9UHM6 478 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms