RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 ZNF322Q6U7Q0 402 aaPredicted RBP13.95□□□□□ -0.18
PKP3-209ENST00000533069 C1orf229Q6ZS94 237 aaPredicted RBP13.95□□□□□ -0.18
PKP3-209ENST00000533069 KCTD8Q6ZWB6 473 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 NLRC3Q7RTR2 1065 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 KRT77Q7Z794 578 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 PHC2Q8IXK0 858 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 CSNK2A3Q8NEV1 391 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 NANPQ8TBE9 248 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 TMEM246Q9BRR3 403 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 MROQ9BYG7 248 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 UFSP2Q9NUQ7 469 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 RNF7Q9UBF6 113 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 KLHDC2Q9Y2U9 406 aa13.95□□□□□ -0.18
PKP3-209ENST00000533069 ZNF205O95201 554 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 SMIM18P0DKX4 95 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 ATP6V1B1P15313 513 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 EPHA1P21709 976 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 GSK3AP49840 483 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 SEC61A1P61619 476 aaKnown RBP13.94□□□□□ -0.18
PKP3-209ENST00000533069 SPHARQ15513 63 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 MPPED2Q15777 294 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 KCNJ8Q15842 424 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 GFOD2Q3B7J2 385 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 LRRN1Q6UXK5 716 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 DCDC5Q6ZRR9 648 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 ZNF679Q8IYX0 411 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 OR8B3Q8NGG8 313 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 OR8S1Q8NH09 359 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 NEIL1Q96FI4 390 aaPredicted RBP13.94□□□□□ -0.18
PKP3-209ENST00000533069 OR8B2Q96RD0 313 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 SSBP3Q9BWW4 388 aaPredicted RBP13.94□□□□□ -0.18
PKP3-209ENST00000533069 OCEL1Q9H607 264 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 BRD7Q9NPI1 651 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 TRIM36Q9NQ86 728 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 LRP12Q9Y561 859 aa13.94□□□□□ -0.18
PKP3-209ENST00000533069 METTL15A6NJ78 407 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 APOL3O95236 402 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ZNF12P17014 697 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 GNALP38405 381 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ETV1P50549 477 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ZNF85Q03923 595 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 OR8B8Q15620 311 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 CCDC58Q4VC31 144 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 LHFPL3Q86UP9 236 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 DEFB108BQ8NET1 73 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ZNF418Q8TF45 676 aaPredicted RBP13.93□□□□□ -0.18
PKP3-209ENST00000533069 DVL3Q92997 716 aaPredicted RBP13.93□□□□□ -0.18
PKP3-209ENST00000533069 ITFG2Q969R8 447 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 OR8B4Q96RC9 309 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ZNF649Q9BS31 505 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ABCB9Q9NP78 766 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 MMP26Q9NRE1 261 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 C1orf123Q9NWV4 160 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 ZNF319Q9P2F9 582 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 OPN4Q9UHM6 478 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 INSIG2Q9Y5U4 225 aa13.93□□□□□ -0.18
PKP3-209ENST00000533069 DYSFO75923 2080 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 STAB1Q9NY15 2570 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 TRAPPC2LH3BP13 241 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 LGALS8O00214 317 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 FSHBP01225 129 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 PITPNBP48739 271 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 GBX2P52951 348 aaPredicted RBP13.92□□□□□ -0.18
PKP3-209ENST00000533069 GNB2P62879 340 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 ZNF154Q13106 437 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 GPR50Q13585 617 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 BLMHQ13867 455 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 MED22Q15528 200 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 FAM201AQ5SY85 155 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 ZNF684Q5T5D7 378 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 SYT6Q5T7P8 510 aaPredicted RBP13.92□□□□□ -0.18
PKP3-209ENST00000533069 SGCDQ92629 289 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 TBX5Q99593 518 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 MRI1Q9BV20 369 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 C19orf24Q9BVV8 132 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 PAPOLGQ9BWT3 736 aaKnown RBP13.92□□□□□ -0.18
PKP3-209ENST00000533069 BATF3Q9NR55 127 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 BABAM2Q9NXR7 383 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 LSM2Q9Y333 95 aaKnown RBP13.92□□□□□ -0.18
PKP3-209ENST00000533069 MPC1Q9Y5U8 109 aa13.92□□□□□ -0.18
PKP3-209ENST00000533069 A6NLC8 198 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 ANXA2P2A6NMY6 339 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 NDUFA2O43678 99 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 GRPP07492 148 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 ADRA2CP18825 462 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 TGM4P49221 684 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 RIDAP52758 137 aaKnown RBP13.91□□□□□ -0.18
PKP3-209ENST00000533069 MLLT11Q13015 90 aaPredicted RBP13.91□□□□□ -0.18
PKP3-209ENST00000533069 ZNF829Q3KNS6 432 aaPredicted RBP13.91□□□□□ -0.18
PKP3-209ENST00000533069 XAF1Q6GPH4 301 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 BTNL3Q6UXE8 466 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 USP43Q70EL4 1123 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 OR8B12Q8NGG6 310 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 ZFAND2BQ8WV99 257 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 MUL1Q969V5 352 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 C4orf36Q96KX1 117 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 MOB1AQ9H8S9 216 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 NDUFA13Q9P0J0 144 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms