RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 CDNFQ49AH0 187 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 DMRTC1Q5HYR2 192 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 PLAC9Q5JTB6 97 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 C1QTNF12Q5T7M4 302 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 ZNF474Q6S9Z5 364 aaPredicted RBP9.4□□□□□ -0.9
SRPRA-205ENST00000531104 FBXW12Q6X9E4 464 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 MOB3CQ70IA8 216 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 MRPL21Q7Z2W9 205 aaKnown RBP9.4□□□□□ -0.9
SRPRA-205ENST00000531104 DOLPP1Q86YN1 238 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 ZSCAN4Q8NAM6 433 aaPredicted RBP9.4□□□□□ -0.9
SRPRA-205ENST00000531104 TMEM229BQ8NBD8 167 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 Q8NFD4 153 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 OR5L1Q8NGL2 311 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 PIGCQ92535 297 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 BORCS8Q96FH0 119 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 NICN1Q9BSH3 213 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 URM1Q9BTM9 101 aaKnown RBP9.4□□□□□ -0.9
SRPRA-205ENST00000531104 CACNG6Q9BXT2 260 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 CST11Q9H112 138 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 BANF2Q9H503 90 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 MRPL15Q9P015 296 aaKnown RBP9.4□□□□□ -0.9
SRPRA-205ENST00000531104 SLC7A11Q9UPY5 501 aa9.4□□□□□ -0.9
SRPRA-205ENST00000531104 CACNA1GO43497 2377 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 ZFHX4Q86UP3 3567 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 FAM230AA0A1W2PPH8 454 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 TMEM235A6NFC5 223 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 HMX3A6NHT5 357 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CD300LBA8K4G0 201 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 ZNF850A8MQ14 1090 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 MFNGO00587 321 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 SOCS1O15524 211 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 SMPD2O60906 423 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CA11O75493 328 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CRTAPO75718 401 aaPredicted RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CD74P04233 296 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 FAM87AP0C7U9 286 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 ZNF35P13682 527 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 MGMTP16455 207 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 NAT1P18440 290 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 MECP2P51608 486 aaKnown RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 ACTBP60709 375 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 ACTG1P63261 375 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CXADRP78310 365 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CD300CQ08708 224 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 PDZK1IP1Q13113 114 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 PRDX4Q13162 271 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 MRPL49Q13405 166 aaKnown RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 TATDN3Q17R31 274 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 PNLIPRP3Q17RR3 467 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 PCGF3Q3KNV8 242 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CEACAM21Q3KPI0 293 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 C3orf36Q3SXR2 165 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 SLC22A6Q4U2R8 563 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 RSBN1Q5VWQ0 802 aaPredicted RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 PLCXD3Q63HM9 321 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 Q6ZTK2 550 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 BHLHA15Q7RTS1 189 aaPredicted RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 STEAP2Q8NFT2 490 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 OR56B1Q8NGI3 324 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 OR5D18Q8NGL1 313 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 HPSE2Q8WWQ2 592 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CMBLQ96DG6 245 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 SNRNP40Q96DI7 357 aaKnown RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 RNF170Q96K19 258 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 Q96M66 194 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 GAL3ST1Q99999 423 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 METTL9Q9H1A3 318 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 TP63Q9H3D4 680 aaPredicted RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 GPR160Q9UJ42 338 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 ELF5Q9UKW6 265 aaPredicted RBP9.39□□□□□ -0.91
SRPRA-205ENST00000531104 KCNK7Q9Y2U2 307 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 AMDHD2Q9Y303 409 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 SLC25A15Q9Y619 301 aa9.39□□□□□ -0.91
SRPRA-205ENST00000531104 CUL9Q8IWT3 2517 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 IGKV1-12A0A0C4DH73 117 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 A0A1W2PR80 420 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 C7orf66A4D0T2 115 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 OR5H1A6NKK0 313 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 AKR7A2O43488 359 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 SSX5O60225 188 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 ZNF780AO75290 641 aaPredicted RBP9.38□□□□□ -0.91
SRPRA-205ENST00000531104 IGKV1D-12P01611 117 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 AKAIN1P0CW23 69 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 TMEM225BP0DP42 221 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 HIST1H1DP16402 221 aaKnown RBP9.38□□□□□ -0.91
SRPRA-205ENST00000531104 PSMB1P20618 241 aaKnown RBP9.38□□□□□ -0.91
SRPRA-205ENST00000531104 TUBG1P23258 451 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 MPZP25189 248 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 RCVRNP35243 200 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 IDH3GP51553 393 aaPredicted RBP9.38□□□□□ -0.91
SRPRA-205ENST00000531104 CCR6P51684 374 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 RTN4RL2Q86UN3 420 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 FJX1Q86VR8 437 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 ZDHHC23Q8IYP9 409 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 SAXO1Q8IYX7 474 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 OR5A2Q8NGI9 324 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
SRPRA-205ENST00000531104 OR5P3Q8WZ94 311 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms