RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 C18orf12Q96KH6 178 aa12.9□□□□□ -0.34
CCS-206ENST00000530961 COX4I2Q96KJ9 171 aa12.9□□□□□ -0.34
CCS-206ENST00000530961 PDCD1LG2Q9BQ51 273 aa12.9□□□□□ -0.34
CCS-206ENST00000530961 CHST5Q9GZS9 411 aa12.9□□□□□ -0.34
CCS-206ENST00000530961 PPP1R3EQ9H7J1 279 aa12.9□□□□□ -0.34
CCS-206ENST00000530961 TREM2Q9NZC2 230 aa12.9□□□□□ -0.34
CCS-206ENST00000530961 A0A096LNT2 108 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 IGHV3-64DA0A0J9YX35 117 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 TMEM178BH3BS89 294 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 LALBAP00709 142 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 CD1AP06126 327 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 GRPP07492 148 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 PMELP40967 661 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 SPHARQ15513 63 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 MPPED2Q15777 294 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 CEP78Q5JTW2 689 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 PRAMEF6Q5VXH4 476 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 KCTD8Q6ZWB6 473 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 OR13C3Q8NGS6 347 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 GHSRQ92847 366 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 CCDC90BQ9GZT6 254 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 TLNRD1Q9H1K6 362 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 UFSP2Q9NUQ7 469 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 RNF7Q9UBF6 113 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 SLC7A11Q9UPY5 501 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 ZNF281Q9Y2X9 895 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 LRRC42Q9Y546 428 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 NPTNQ9Y639 398 aa12.89□□□□□ -0.35
CCS-206ENST00000530961 SIRT4Q9Y6E7 314 aaPredicted RBP12.89□□□□□ -0.35
CCS-206ENST00000530961 A6NIN4 97 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 A6NLC8 198 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 H3BSH0 61 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 WIPF1O43516 503 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 PLPP2O43688 288 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 MT-ND2P03891 347 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 INHBBP09529 407 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 ZNF20P17024 532 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 THBS2P35442 1172 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 CFHR2P36980 270 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 CHN2P52757 468 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 ZNF154Q13106 437 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 YIF1BQ5BJH7 314 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 UTS2BQ765I0 119 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 WDR86Q86TI4 376 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 CIARTQ8N365 385 aaPredicted RBP12.88□□□□□ -0.35
CCS-206ENST00000530961 ZNF420Q8TAQ5 688 aaPredicted RBP12.88□□□□□ -0.35
CCS-206ENST00000530961 GPR148Q8TDV2 347 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 FGGYQ96C11 551 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 GPR173Q9NS66 373 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 C1orf123Q9NWV4 160 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 DHDHQ9UQ10 334 aa12.88□□□□□ -0.35
CCS-206ENST00000530961 IGHV4-61A0A0C4DH41 118 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 LRP5LA4QPB2 252 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 ZNF732B4DXR9 585 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 CD2P06729 351 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 HEXAP06865 529 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 CELP19835 753 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 GPM6AP51674 278 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 BTG1P62324 171 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 GPR50Q13585 617 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 CNN3Q15417 329 aaKnown RBP12.87□□□□□ -0.35
CCS-206ENST00000530961 MED22Q15528 200 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 CLEC9AQ6UXN8 241 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 LRRC28Q86X40 367 aaPredicted RBP12.87□□□□□ -0.35
CCS-206ENST00000530961 ZNF573Q86YE8 665 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 SERPINA12Q8IW75 414 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 C11orf53Q8IXP5 236 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 PARP16Q8N5Y8 322 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 OR51A4Q8NGJ6 313 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 OR5D14Q8NGL3 314 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 OR10AC1Q8NH08 325 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 TSEN15Q8WW01 171 aaKnown RBP12.87□□□□□ -0.35
CCS-206ENST00000530961 ADAT3Q96EY9 351 aaPredicted RBP12.87□□□□□ -0.35
CCS-206ENST00000530961 FGF23Q9GZV9 251 aaPredicted RBP12.87□□□□□ -0.35
CCS-206ENST00000530961 OR51I2Q9H344 312 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 NEK6Q9HC98 313 aa12.87□□□□□ -0.35
CCS-206ENST00000530961 LSM2Q9Y333 95 aaKnown RBP12.87□□□□□ -0.35
CCS-206ENST00000530961 PPIAL4EA0A075B759 164 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 hCG_1807616A0A1W2PRN6 198 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 PPIAL4DF5H284 164 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 CDIPTO14735 213 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 SMAD7O15105 426 aaKnown RBP12.86□□□□□ -0.35
CCS-206ENST00000530961 LMX1BO60663 402 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 ALX3O95076 343 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 CYB5R3P00387 301 aaPredicted RBP12.86□□□□□ -0.35
CCS-206ENST00000530961 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 PPIAL4FP0DN26 164 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 PRKACBP22694 351 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 MDH2P40926 338 aaKnown RBP12.86□□□□□ -0.35
CCS-206ENST00000530961 FUT6P51993 359 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 UBE2V2Q15819 145 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 TMEM155Q4W5P6 130 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 AVPI1Q5T686 147 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 MUC20Q8N307 709 aaPredicted RBP12.86□□□□□ -0.35
CCS-206ENST00000530961 SVOPQ8N4V2 548 aa12.86□□□□□ -0.35
CCS-206ENST00000530961 DNAAF1Q8NEP3 725 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms