RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SCN1BQ07699 218 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 BIVMQ86UB2 503 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-216ENST00000530004 PNLDC1Q8NA58 520 aaKnown RBP12.38□□□□□ -0.43
TTC39A-216ENST00000530004 UBASH3BQ8TF42 649 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 PIGCQ92535 297 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 SPSB1Q96BD6 273 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 NPAP1Q9NZP6 1156 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
TTC39A-216ENST00000530004 KCNN3Q9UGI6 736 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 TBC1D24Q9ULP9 559 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 RABL2BQ9UNT1 228 aa12.38□□□□□ -0.43
TTC39A-216ENST00000530004 HCFC1P51610 2035 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 J3QW42 95 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 SMPD2O60906 423 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 IGLV1-44P01699 117 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 FAM157BP0CG42 384 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 OXA1LQ15070 435 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 TRIM16LQ309B1 348 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 CRIP3Q6Q6R5 217 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 GLIPR1L1Q6UWM5 242 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 WFDC8Q8IUA0 241 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 ACBD4Q8NC06 268 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 C19orf18Q8NEA5 215 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 OR5D18Q8NGL1 313 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 GAL3ST1Q99999 423 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 ATG5Q9H1Y0 275 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 NEK6Q9HC98 313 aa12.37□□□□□ -0.43
TTC39A-216ENST00000530004 FLNCQ14315 2725 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 FAM230AA0A1W2PPH8 454 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 A1L4Q6 167 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 CTDSPLO15194 276 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 XRCC3O43542 346 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 ICMTO60725 284 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 HLA-DQB1P01920 261 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 CECR9P0C854 216 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 RAB6AP20340 208 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 PRKACBP22694 351 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 RANBP1P43487 201 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 KIR2DL3P43628 341 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 PTH2RP49190 550 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 MMP15P51511 669 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 ZNF83P51522 516 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 TAS2R20P59543 309 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 C3orf36Q3SXR2 165 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 RNASE12Q5GAN4 147 aaKnown RBP12.36□□□□□ -0.43
TTC39A-216ENST00000530004 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 PLCXD3Q63HM9 321 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 MOB3CQ70IA8 216 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 SETD6Q8TBK2 473 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 PTX4Q96A99 478 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 PHF21AQ96BD5 680 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 THAP7Q9BT49 309 aaPredicted RBP12.36□□□□□ -0.43
TTC39A-216ENST00000530004 DIABLOQ9NR28 239 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 CRIM1Q9NZV1 1036 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 RAB22AQ9UL26 194 aa12.36□□□□□ -0.43
TTC39A-216ENST00000530004 IGHV1-18A0A0C4DH31 117 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 CD300LBA8K4G0 201 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 ZNF850A8MQ14 1090 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 KDM4BO94953 1096 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 PTGFRP43088 359 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 INPP1P49441 399 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 MTCP1P56278 107 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 PPP1CBP62140 327 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 QRFPP83859 136 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 DGCR2P98153 550 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 UNC119Q13432 240 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 Q6ZNX1 250 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 FTMTQ8N4E7 242 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 MINDY2Q8NBR6 621 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 CSNK2A3Q8NEV1 391 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 TNFAIP8L1Q8WVP5 186 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 TRIM63Q969Q1 353 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 ITFG2Q969R8 447 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 BORCS8Q96FH0 119 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 C1orf147Q96MC9 270 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-216ENST00000530004 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 PAPOLGQ9BWT3 736 aaKnown RBP12.35□□□□□ -0.43
TTC39A-216ENST00000530004 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 GPR160Q9UJ42 338 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 ADGRG4Q8IZF6 3080 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 TMEM14DPA8MWL7 114 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 M0R1B8 84 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 LANCL1O43813 399 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 PTTG1O95997 202 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 ZNF35P13682 527 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 MNDAP41218 407 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 RBP2P50120 134 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 UCP2P55851 309 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 MEX3BQ6ZN04 569 aaKnown RBP12.35□□□□□ -0.43
TTC39A-216ENST00000530004 LHFPL2Q6ZUX7 228 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 GCDHQ92947 438 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-216ENST00000530004 CPNE2Q96FN4 548 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-216ENST00000530004 FBLN5Q9UBX5 448 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 PRR14LQ5THK1 2151 aa12.35□□□□□ -0.43
TTC39A-216ENST00000530004 IGKV1-27A0A075B6S5 117 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms