RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ERGP11308 486 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 HLA-GP17693 338 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 RBM34P42696 430 aaKnown RBP2.85□□□□□ -1.95
C11orf88-204ENST00000529661 MAGEA3P43357 314 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 TGM4P49221 684 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 P2RX1P51575 399 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 AP1S2P56377 157 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 UBE2NP61088 152 aaKnown RBP2.85□□□□□ -1.95
C11orf88-204ENST00000529661 KIR2DS1Q14954 304 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 GOLGA7BQ2TAP0 167 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 DEFB116Q30KQ4 102 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 IDNKQ5T6J7 187 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 CEMP1Q6PRD7 247 aaPredicted RBP2.85□□□□□ -1.95
C11orf88-204ENST00000529661 IGFL3Q6UXB1 125 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 PAGE2Q7Z2X7 111 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 FUNDC1Q8IVP5 155 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 FAM71AQ8IYT1 594 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 DAW1Q8N136 415 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 LRRC52Q8N7C0 313 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 DNAJB3Q8WWF6 145 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 CDS1Q92903 461 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 NTAN1Q96AB6 310 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 RNF145Q96MT1 663 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 HBEGFQ99075 208 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 PLA2G2FQ9BZM2 168 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 USE1Q9NZ43 259 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 MTFP1Q9UDX5 166 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 OR12D3Q9UGF7 316 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 RAB26Q9ULW5 256 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 CFL2Q9Y281 166 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 OR51B2Q9Y5P1 312 aa2.85□□□□□ -1.95
C11orf88-204ENST00000529661 IGHV5-10-1A0A0J9YXX1 117 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 SULT1C2O00338 296 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 SLC16A7O60669 478 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 SPAG7O75391 227 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ATP5HO75947 161 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 OR5AL1P0C617 328 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ZNF823P16415 610 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ARL2P36404 184 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 HCAR3P49019 387 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 PPP1CBP62140 327 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 RPS23P62266 143 aaKnown RBP2.84□□□□□ -1.95
C11orf88-204ENST00000529661 FLOT2Q14254 428 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 UBE2SQ16763 222 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 SLC36A2Q495M3 483 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ORMDL2Q53FV1 153 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 GCSAMLQ5JQS6 135 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 TIMM23BQ5SRD1 257 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 PRSS58Q8IYP2 241 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ENTHD1Q8IYW4 607 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 CYP4Z2PQ8N1L4 340 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 METTL13Q8N6R0 699 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 OR5T1Q8NG75 326 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 OR10Z1Q8NGY1 313 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 OR5W2Q8NH69 310 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 DOK4Q8TEW6 326 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 TMEM234Q8WY98 164 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 IFT81Q8WYA0 676 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 CPNE4Q96A23 557 aaPredicted RBP2.84□□□□□ -1.95
C11orf88-204ENST00000529661 DYNLL2Q96FJ2 89 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 OSBPL11Q9BXB4 747 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 BEX2Q9BXY8 128 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 DERL2Q9GZP9 239 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 SPNS1Q9H2V7 528 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ZDHHC4Q9NPG8 344 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 SLC39A1Q9NY26 324 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ZNF223Q9UK11 482 aaPredicted RBP2.84□□□□□ -1.95
C11orf88-204ENST00000529661 FBXL3Q9UKT7 428 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 KLF12Q9Y4X4 402 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 ADAMTSL3P82987 1691 aa2.84□□□□□ -1.95
C11orf88-204ENST00000529661 NUP153P49790 1475 aaKnown RBP2.84□□□□□ -1.96
C11orf88-204ENST00000529661 A0A0J9YXV3 536 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 A0A1B0GX12 115 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 GOLGA8IPA6NC78 632 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 ZNF233A6NK53 670 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 GOLGA8JA6NMD2 632 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 GOLGA8KD6RF30 607 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 GOLGA8MH3BSY2 632 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 H7C1H1 209 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 SLC31A1O15431 190 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 TRAPPC3O43617 180 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 CYTH3O43739 400 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 RDH16O75452 317 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 GOLGA8HP0CJ92 632 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PGA5P0DJD9 388 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 IGHV1-8P0DP01 117 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 LIPCP11150 499 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 GABRG2P18507 467 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 MAGP20916 626 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PSMB5P28074 263 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 PFN2P35080 140 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 UBE2E1P51965 193 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 ESRRGP62508 458 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 RAP1AP62834 184 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 IRF4Q15306 451 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 TMEM249Q2WGJ8 235 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 AVPI1Q5T686 147 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 SDHAF4Q5VUM1 108 aa2.83□□□□□ -1.96
C11orf88-204ENST00000529661 TMEM205Q6UW68 189 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms