RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 VAX1Q5SQQ9 334 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 CRIP3Q6Q6R5 217 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 PLXDC2Q6UX71 529 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 NUFIP2Q7Z417 695 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 FTMTQ8N4E7 242 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 ZSCAN4Q8NAM6 433 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 OR2AE1Q8NHA4 323 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 SARAFQ96BY9 339 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 OR2A7Q96R45 310 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 SEC22CQ9BRL7 303 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 REPIN1Q9BWE0 567 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 TINAGL1Q9GZM7 467 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 BANF2Q9H503 90 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 GPR173Q9NS66 373 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 B3GNT2Q9NY97 397 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 SPRR3Q9UBC9 169 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 MGAT4CQ9UBM8 478 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 EIF3KQ9UBQ5 218 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 HSF4Q9ULV5 492 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 KCNK7Q9Y2U2 307 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 ZNF407Q9C0G0 2248 aa12.83□□□□□ -0.36
ECHDC1-220ENST00000528402 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 J3QW42 95 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 SOCS1O15524 211 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 RGS11O94810 467 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 FCER2P06734 321 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 VSIG10L2P0DP72 767 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 DNASE1P24855 282 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 EIF2S3P41091 472 aaKnown RBP12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 CXADRP78310 365 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 TGFBR3Q03167 851 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 ZNF92Q03936 586 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 CLN3Q13286 438 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 CAMK2BQ13554 666 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 RSU1Q15404 277 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 PLAC9Q5JTB6 97 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 RNF144BQ7Z419 303 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 TMEM17Q86X19 198 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 ZADH2Q8N4Q0 377 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 OR1K1Q8NGR3 316 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 OR4K15Q8NH41 348 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 SNAPC3Q92966 411 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 CMBLQ96DG6 245 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 EDARQ9UNE0 448 aa12.82□□□□□ -0.36
ECHDC1-220ENST00000528402 MYO7BQ6PIF6 2116 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 H3BUI4 141 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 M0QYG6 137 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 TPD52L2O43399 206 aaKnown RBP12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 SSX5O60225 188 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 CST4P01036 141 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 CD79AP11912 226 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 EDN3P14138 238 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 BLVRBP30043 206 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 APLNRP35414 380 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 TAS2R46P59540 309 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 ARFRP1Q13795 201 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 C4orf46Q504U0 113 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 MOB3CQ70IA8 216 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 NLRC3Q7RTR2 1065 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 C1QL2Q7Z5L3 287 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 NPRL2Q8WTW4 380 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 ST8SIA4Q92187 359 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 BCL2L2Q92843 193 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 ARHGAP5-AS1Q96IT6 56 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 POM121L2Q96KW2 1035 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 SLC6A7Q99884 636 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 PECRQ9BY49 303 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 ELL3Q9HB65 397 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 ELF5Q9UKW6 265 aaPredicted RBP12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 MGAT4AQ9UM21 535 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 ARHGAP21Q5T5U3 1957 aa12.81□□□□□ -0.36
ECHDC1-220ENST00000528402 LOC100509620A0A075B734 347 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 A0A096LPE4 126 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 FAM230AA0A1W2PPH8 454 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 A0A1W2PPZ6 126 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 HLA-HP01893 362 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 OR4E1P0C645 316 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 SERPINA2P20848 420 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 PMELP40967 661 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 TAS2R31P59538 309 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 DEFB109BQ30KR1 87 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 SCGB2B2Q4G0G5 96 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 LPCAT3Q6P1A2 487 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 ZNF767PQ75MW2 155 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 MRPL21Q7Z2W9 205 aaKnown RBP12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 SLC25A42Q86VD7 318 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 SAXO1Q8IYX7 474 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 OR2AK2Q8NG84 335 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 PIGCQ92535 297 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 Q96M66 194 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 TMPRSS13Q9BYE2 586 aa12.8□□□□□ -0.36
ECHDC1-220ENST00000528402 POFUT1Q9H488 388 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms