RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 DOK3Q7L591 496 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 KMT5CQ86Y97 462 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 TMEM156Q8N614 296 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 OR56B1Q8NGI3 324 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 FBXO17Q96EF6 278 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 ALKBH3Q96Q83 286 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 SMOC1Q9H4F8 434 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 MYOZ1Q9NP98 299 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 CYTL1Q9NRR1 136 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 SLC33A1O00400 549 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 CHRM2P08172 466 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 NFYBP25208 207 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 RFC3P40938 356 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 ZNF385CQ66K41 422 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 ZNF774Q6NX45 483 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 PIGQQ9BRB3 760 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 ZNF2Q9BSG1 426 aaPredicted RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 URM1Q9BTM9 101 aaKnown RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 SRXN1Q9BYN0 137 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 TLNRD1Q9H1K6 362 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 PLEKHJ1Q9NW61 149 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 WNT16Q9UBV4 365 aa6.53□□□□□ -1.36
C11orf54-207ENST00000528288 LSM5Q9Y4Y9 91 aaKnown RBP6.53□□□□□ -1.36
C11orf54-207ENST00000528288 A0A0J9YW62 118 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 DBX1A6NMT0 343 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 F8W036 122 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 K7ESF4 209 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 MSTNO14793 375 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 MSR1P21757 451 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 EPHA8P29322 1005 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 PTGER4P35408 488 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ASCL1P50553 236 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 MTCP1P56278 107 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 BLOC1S1P78537 153 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 HGFACQ04756 655 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ZNF345Q14585 488 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 BAP18Q8IXM2 172 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 SPEM1Q8N4L4 309 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 REEP6Q96HR9 211 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 GPHA2Q96T91 129 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 LIME1Q9H400 295 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 DKKL1Q9UK85 242 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 COL5A1P20908 1838 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 M0R135 149 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 LRP3O75074 770 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 PDGFBP01127 241 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 B4GALT1P15291 398 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 PCOLCEQ15113 449 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 PDSS1Q5T2R2 415 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ETV3LQ6ZN32 361 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 LDLRAD3Q86YD5 345 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 OR4A4PQ8NGN8 299 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 OR6S1Q8NH40 331 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 BSCL2Q96G97 398 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ZNF799Q96GE5 643 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ULBP2Q9BZM5 246 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 NXT1Q9UKK6 140 aaKnown RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 FREM1Q5H8C1 2179 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ZNF407Q9C0G0 2248 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 TEX13DA0A0J9YY54 714 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 TLX3O43711 291 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ZIC3O60481 467 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 UMODP07911 640 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 TPT1P13693 172 aaKnown RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 MSX1P28360 303 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 SRSF4Q08170 494 aaKnown RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 PIGYQ3MUY2 71 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 PHLDA2Q53GA4 152 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 LYSMD4Q5XG99 296 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 ZFP82Q8N141 532 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 SEMA6DQ8NFY4 1073 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 MAFAQ8NHW3 353 aaPredicted RBP6.52□□□□□ -1.37
C11orf54-207ENST00000528288 HPF1Q9NWY4 346 aa6.52□□□□□ -1.37
C11orf54-207ENST00000528288 TMEM218A2RU14 115 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 PMS2P1A4D2B8 440 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 DHHO43323 396 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 XRCC2O43543 280 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 TRAPPC6AO75865 159 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 ATG12O94817 140 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 DIRAS3O95661 229 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 LCATP04180 440 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 CD63P08962 238 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 CTRB1P17538 263 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 NPBWR1P48145 328 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 SLC35A1P78382 337 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 RIPPLY1Q0D2K3 151 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 IAH1Q2TAA2 248 aaPredicted RBP6.51□□□□□ -1.37
C11orf54-207ENST00000528288 CTRB2Q6GPI1 263 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 FAM122CQ6P4D5 195 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 OR9K2Q8NGE7 335 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 FGFBP3Q8TAT2 258 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 IFI44Q8TCB0 444 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 MRPL24Q96A35 216 aaKnown RBP6.51□□□□□ -1.37
C11orf54-207ENST00000528288 SGK3Q96BR1 496 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 PROK2Q9HC23 129 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 CRLF2Q9HC73 371 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 ZNF107Q9UII5 783 aaPredicted RBP6.51□□□□□ -1.37
C11orf54-207ENST00000528288 ADAMTS20P59510 1910 aa6.51□□□□□ -1.37
C11orf54-207ENST00000528288 LOC400499M0QZD8 3231 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms