RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MS4A7Q9GZW8 240 aaPredicted RBP27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 ENPP5Q9UJA9 477 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 OR52A1Q9UKL2 312 aa27.4■■□□□ 1.98
SSSCA1-205ENST00000527920 DHRS7CA6NNS2 312 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 EI24O14681 340 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 ALDH3A2P51648 485 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 GPM6AP51674 278 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 STUMQ69YW2 141 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 SIGLECL1Q8N7X8 197 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 PPP1R14AQ96A00 147 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 RAB3IPQ96QF0 476 aaPredicted RBP27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 OR51I2Q9H344 312 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 ZMAT3Q9HA38 289 aaKnown RBP27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 PIGLQ9Y2B2 252 aa27.39■■□□□ 1.98
SSSCA1-205ENST00000527920 TRAV40A0A0B4J280 105 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 ZNF879B4DU55 563 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 E9PQ18 207 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 GPR37O15354 613 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 MAGEB4O15481 346 aaPredicted RBP27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 FCN3O75636 299 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 SULT1C4O75897 302 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 KRT8P05787 483 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 MTNR1AP48039 350 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 UBA52P62987 128 aaKnown RBP27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 SLC25A30Q5SVS4 291 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 ZNF684Q5T5D7 378 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 SSX6Q7RTT6 188 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 BCL6BQ8N143 479 aaPredicted RBP27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 DMRTB1Q96MA1 342 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 IMPAD1Q9NX62 359 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 GTF2A1LQ9UNN4 478 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 ANK2Q01484 3957 aa27.38■■□□□ 1.97
SSSCA1-205ENST00000527920 A0A1W2PQL4 384 aaPredicted RBP27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 FAHP16930 419 aa27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 COMPP49747 757 aaPredicted RBP27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 ACTG1P63261 375 aa27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 CCL13Q99616 98 aa27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 RASSF4Q9H2L5 321 aa27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 DNAJB11Q9UBS4 358 aa27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 V9GYS6 101 aa27.37■■□□□ 1.97
SSSCA1-205ENST00000527920 ZNF732B4DXR9 585 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 P2RY10O00398 339 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 MMP9P14780 707 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 TGM4P49221 684 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 CEP78Q5JTW2 689 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 TMEM42Q69YG0 159 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 BTN2A1Q7KYR7 527 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 SEH1LQ96EE3 360 aa27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP27.36■■□□□ 1.97
SSSCA1-205ENST00000527920 A0A1B0GTI1 187 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 TMEM89A2RUT3 159 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 METTL15A6NJ78 407 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 CCL1P22362 96 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 ATP6V1E1P36543 226 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 SNRPGP62308 76 aaKnown RBP27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 GPR157Q5UAW9 335 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 PLCXD3Q63HM9 321 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 PLEKHG7Q6ZR37 379 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 YIPF7Q8N8F6 280 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 OR10H4Q8NGA5 316 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 ZNF48Q96MX3 618 aaPredicted RBP27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 TBX5Q99593 518 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 WDR13Q9H1Z4 485 aa27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 RPUSD1Q9UJJ7 312 aaKnown RBP27.35■■□□□ 1.97
SSSCA1-205ENST00000527920 DLGAP1O14490 977 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 NRASP01111 189 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 AMY2BP19961 511 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 CLVS2Q5SYC1 327 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 CBR4Q8N4T8 237 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 ZNF671Q8TAW3 534 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 ST8SIA4Q92187 359 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 WDFY2Q96P53 400 aa27.34■■□□□ 1.97
SSSCA1-205ENST00000527920 IGHV3OR16-10A0A075B7F0 116 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 NKX6-3A6NJ46 265 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 CLDN34H7C241 214 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 AKR7A2O43488 359 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 APOL3O95236 402 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 PRTN3P24158 256 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 METTL11BQ5VVY1 283 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 MEDAGQ5VYS4 303 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 ZNF788Q6ZQV5 615 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 MOB3CQ70IA8 216 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 CATSPERDQ86XM0 798 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 FAM216BQ8N7L0 139 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 OR14K1Q8NGZ2 314 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 ANGPTL6Q8NI99 470 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 AQP3Q92482 292 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 SIRPDQ9H106 197 aa27.33■■□□□ 1.97
SSSCA1-205ENST00000527920 A0A1B0GW55 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 NDUFB3O43676 98 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 TOX4O94842 621 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L2P0CJ85 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L3P0CJ86 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L4P0CJ87 422 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L5P0CJ88 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L6P0CJ89 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L7P0CJ90 424 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 ELF3P78545 371 aaPredicted RBP27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 LRRC10Q5BKY1 277 aa27.32■■□□□ 1.96
SSSCA1-205ENST00000527920 DUX4L9Q6RFH8 374 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms