RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 LCN1P1Q5VSP4 162 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 C1orf146Q5VVC0 180 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 NXNL2Q5VZ03 156 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 KCTD18Q6PI47 426 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF322Q6U7Q0 402 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 Q6YL49 198 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF788Q6ZQV5 615 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 PLEKHG7Q6ZR37 379 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 KCTD8Q6ZWB6 473 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 SSX6Q7RTT6 188 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 PDZD9Q8IXQ8 264 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 SLC35F2Q8IXU6 374 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 PNLDC1Q8NA58 520 aaKnown RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ANGPTL6Q8NI99 470 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ASB17Q8WXJ9 295 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 LHX4Q969G2 390 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 C12orf43Q96C57 262 aaKnown RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 FAM71F1Q96KD3 344 aaPredicted RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 GAFA1Q96PS6 74 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 CNN2Q99439 309 aaKnown RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 CIB1Q99828 191 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF747Q9BV97 191 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 MROQ9BYG7 248 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 SEMA6AQ9H2E6 1030 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 CNTD2Q9H8S5 307 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ZMAT3Q9HA38 289 aaKnown RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 TNFRSF19Q9NS68 423 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 NUFIP1Q9UHK0 495 aaKnown RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 MRM2Q9UI43 246 aaKnown RBP8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF391Q9UJN7 358 aa8.6□□□□□ -1.03
PRPF40B-204ENST00000527253 IGKV1D-17A0A075B6S4 117 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 A0A1B0GTI1 187 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF732B4DXR9 585 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 IGHV1-69P01742 117 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 MELTFP08582 738 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 FAHP16930 419 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 OMGP23515 440 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 MAP2K3P46734 347 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 RIDAP52758 137 aaKnown RBP8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 CXCR4P61073 352 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 C11orf91Q3C1V1 193 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 CEACAM21Q3KPI0 293 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 METTL11BQ5VVY1 283 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 C16orf87Q6PH81 154 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 MOB3CQ70IA8 216 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 ZDHHC13Q8IUH4 622 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 FTMTQ8N4E7 242 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 Q8N7P7 452 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 FAM81AQ8TBF8 368 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 AQP3Q92482 292 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 ZDHHC16Q969W1 377 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 SLC25A28Q96A46 364 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 DCTN5Q9BTE1 182 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 ABCB9Q9NP78 766 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 ZNF222Q9UK12 451 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 IKZF2Q9UKS7 526 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 SLC22A13Q9Y226 551 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 PIGLQ9Y2B2 252 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 TMEM14AQ9Y6G1 99 aa8.59□□□□□ -1.03
PRPF40B-204ENST00000527253 A0A0U1RQK1 487 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 A6NIN4 97 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 NDUFB3O43676 98 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ATP5HO75947 161 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 APOL3O95236 402 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ACAA1P09110 424 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 MDKP21741 143 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 BPIFB3P59826 476 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 GNG3P63215 75 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 RELBQ01201 579 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 RIPPLY1Q0D2K3 151 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 PDCD1Q15116 288 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF829Q3KNS6 432 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 CDONQ4KMG0 1287 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF684Q5T5D7 378 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 TMEM42Q69YG0 159 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ASRGL1Q7L266 308 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 SLC36A1Q7Z2H8 476 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 VMO1Q7Z5L0 202 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ELMOD2Q8IZ81 293 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 OR5A2Q8NGI9 324 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 OR51G2Q8NGK0 314 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 OR14K1Q8NGZ2 314 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 C8orf46Q8TAG6 207 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 GATAD2BQ8WXI9 593 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 TNFRSF14Q92956 283 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 UBE2FQ969M7 185 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ZNF488Q96MN9 340 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 HIST1H2AAQ96QV6 131 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 CHIAQ9BZP6 476 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 UNKLQ9H9P5 680 aaKnown RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 ELL3Q9HB65 397 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 NOX4Q9NPH5 578 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 CLN6Q9NWW5 311 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 H2AFY2Q9P0M6 372 aaPredicted RBP8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 NLKQ9UBE8 527 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 DNAJB11Q9UBS4 358 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 OAZ3Q9UMX2 235 aa8.58□□□□□ -1.04
PRPF40B-204ENST00000527253 MAB21L2Q9Y586 359 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms