RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 TSPAN9O75954 239 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 CD63P08962 238 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 OTX1P32242 354 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-228ENST00000524023 AKR1C2P52895 323 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 AKR1C1Q04828 323 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 STK11Q15831 433 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 PDSS1Q5T2R2 415 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 CLRN3Q8NCR9 226 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 SAP25Q8TEE9 199 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 HAS2Q92819 552 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 EMG1Q92979 244 aaKnown RBP9.71□□□□□ -0.86
HDAC9-228ENST00000524023 CLDN23Q96B33 292 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 C2orf50Q96LR7 162 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 GNRHR2Q96P88 292 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 AQP10Q96PS8 301 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 S100A13Q99584 98 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 WDR54Q9H977 334 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 SLC39A1Q9NY26 324 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 PIGLQ9Y2B2 252 aa9.71□□□□□ -0.86
HDAC9-228ENST00000524023 KIAA1549Q9HCM3 1950 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 FIGNL2A6NMB9 653 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 NPIPA2E9PIF3 369 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 NPIPA3F8WFD2 350 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 DHHO43323 396 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 GDF9O60383 454 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 EIF1BO60739 113 aaKnown RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 VAMP5O95183 116 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ACTL6AO96019 429 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 FAM157CP0CG43 387 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CPT2P23786 658 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 IL15RAQ13261 267 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 RAB32Q13637 225 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 SURF2Q15527 256 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CHRFAM7AQ494W8 412 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CCDC157Q569K6 752 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 DRAM2Q6UX65 266 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 TMEM123Q8N131 208 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 POC1AQ8NBT0 407 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 OR9K2Q8NGE7 335 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 PIGTQ969N2 578 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 NECAB3Q96P71 396 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 UCN2Q96RP3 112 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 TSNAXQ99598 290 aaKnown RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 RBM24Q9BX46 236 aaKnown RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 FRYLO94915 3013 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CNTRLQ7Z7A1 2325 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 IGKV1D-8A0A087WSZ0 117 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 IGHV1-45A0A0A0MS14 117 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 M0R135 149 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ABCD4O14678 606 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CA11O75493 328 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CSTBP04080 98 aaKnown RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 HOXB5P09067 269 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 DBHP09172 617 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 CCL3P10147 92 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ADCYAP1P18509 176 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ARL6IP1Q15041 203 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 PLEKHN1Q494U1 663 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 PABPC1L2AQ5JQF8 200 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 RAET1LQ5VY80 246 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF585AQ6P3V2 769 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 OPN5Q6U736 354 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 OR51F2Q8NH61 342 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ARL11Q969Q4 196 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF799Q96GE5 643 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 PIGQQ9BRB3 760 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ANGPTL4Q9BY76 406 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 ELL3Q9HB65 397 aaPredicted RBP9.7□□□□□ -0.86
HDAC9-228ENST00000524023 PROK2Q9HC23 129 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 FSCN3Q9NQT6 498 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 DNAJB11Q9UBS4 358 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 PCDHGA1Q9Y5H4 931 aa9.7□□□□□ -0.86
HDAC9-228ENST00000524023 SDK2Q58EX2 2172 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 NUDT19A8MXV4 375 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 GPR31O00270 319 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 ZIC3O60481 467 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PET100P0DJ07 73 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 FGF5P12034 268 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 LIFP15018 202 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PTGER4P35408 488 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF84P51523 738 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 DSCR4P56555 118 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PPA1Q15181 289 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 LYSMD4Q5XG99 296 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 RTL6Q6ICC9 239 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 C6orf201Q7Z4U5 140 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 FAM219AQ8IW50 185 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PUSL1Q8N0Z8 303 aaKnown RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 OR5T2Q8NGG2 359 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 C10orf35Q96D05 121 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 NAA11Q9BSU3 229 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 ZNF701Q9NV72 531 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PLEK2Q9NYT0 353 aa9.69□□□□□ -0.86
HDAC9-228ENST00000524023 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 PURGQ9UJV8 347 aaKnown RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 NXT1Q9UKK6 140 aaKnown RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 MCTS1Q9ULC4 181 aaKnown RBP9.69□□□□□ -0.86
HDAC9-228ENST00000524023 C14orf166Q9Y224 244 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms