RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TMPRSS11FQ6ZWK6 438 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 THAP5Q7Z6K1 395 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 DHDDSQ86SQ9 333 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 EIF1ADQ8N9N8 165 aaKnown RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 OR4Q3Q8NH05 313 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 PRRC1Q96M27 445 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 RBM14Q96PK6 669 aaKnown RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 GPX7Q96SL4 187 aaPredicted RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 FGF23Q9GZV9 251 aaPredicted RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 KAT8Q9H7Z6 458 aaKnown RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 SP140LQ9H930 580 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 SRA1Q9HD15 236 aaKnown RBP10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 CCDC167Q9P0B6 97 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 RHBDD3Q9Y3P4 386 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 N6AMT1Q9Y5N5 214 aa10.91□□□□□ -0.66
NKX3-1-202ENST00000523261 TMEM210A6NLX4 147 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 NDUFB2O95178 105 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 NOS3P29474 1203 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 PRKXP51817 358 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 STX1BP61266 288 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 LCN8Q6JVE9 175 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 NDNFQ8TB73 568 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 NOL4LQ96MY1 436 aaPredicted RBP10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 RTL8AQ9BWD3 113 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 PAPOLGQ9BWT3 736 aaKnown RBP10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 ROPN1BQ9BZX4 212 aaPredicted RBP10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 NDEL1Q9GZM8 345 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 ROPN1Q9HAT0 212 aaPredicted RBP10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 TBC1D23Q9NUY8 699 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 THAP1Q9NVV9 213 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 IER3IP1Q9Y5U9 82 aa10.9□□□□□ -0.66
NKX3-1-202ENST00000523261 ANXA2P2A6NMY6 339 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 TXNDC12O95881 172 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 RBP4P02753 201 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 GZMMP51124 257 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 SLC7A2P52569 658 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 IFFO1Q0D2I5 559 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 VMACQ2NL98 169 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 KLHL12Q53G59 568 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 RNF113BQ8IZP6 322 aaKnown RBP10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 OR8U1Q8NH10 309 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 CHPT1Q8WUD6 406 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 GATAD1Q8WUU5 269 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 LINC00476Q8WZB0 136 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 C16orf45Q96MC5 204 aaPredicted RBP10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 CDRT15Q96T59 188 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 MRPL22Q9NWU5 206 aaKnown RBP10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 SIGLEC7Q9Y286 467 aa10.89□□□□□ -0.67
NKX3-1-202ENST00000523261 A0A087WUU8 490 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 hCG_38984A0A1B0GV85 526 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 MTRF1O75570 445 aaKnown RBP10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 PIPP12273 146 aaPredicted RBP10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 ZNF823P16415 610 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 RPS27P42677 84 aaKnown RBP10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 INSL3P51460 131 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 SLC18A1P54219 525 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 IL18R1Q13478 541 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 KRT72Q14CN4 511 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 TBPL2Q6SJ96 375 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 C16orf89Q6UX73 402 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 LCNL1Q6ZST4 164 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 MBOAT2Q6ZWT7 520 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 SATL1Q86VE3 508 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 OFCC1Q8IZS5 231 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 COMMD1Q8N668 190 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 OR10A6Q8NH74 314 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 OR5P3Q8WZ94 311 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 SGK3Q96BR1 496 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 REEP6Q96HR9 211 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 CGREF1Q99674 301 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 C1orf21Q9H246 121 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 DCLRE1BQ9H816 532 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 SSU72Q9NP77 194 aaKnown RBP10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 RHCGQ9UBD6 479 aa10.88□□□□□ -0.67
NKX3-1-202ENST00000523261 TRIM64CA6NLI5 447 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 M0QZK8 103 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ZNF728P0DKX0 622 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 TROVE2P10155 538 aaKnown RBP eCLIP10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 BRS3P32247 399 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 GSK3AP49840 483 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 FXYD6P3P58550 94 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ACTA2P62736 377 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ACTG2P63267 376 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ACTC1P68032 377 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ACTA1P68133 377 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 TRAM2Q15035 370 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 FAM27D1Q5T7N8 215 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ZNF730Q6ZMV8 503 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ZBTB46Q86UZ6 589 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ZDHHC21Q8IVQ6 265 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 ZNF561Q8N587 486 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 CSNK2A3Q8NEV1 391 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 HPSE2Q8WWQ2 592 aa10.87□□□□□ -0.67
NKX3-1-202ENST00000523261 STMN2Q93045 179 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms