RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TEAD3Q99594 435 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 YIPF3Q9GZM5 350 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 SEMA6AQ9H2E6 1030 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 OR51I2Q9H344 312 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 ZNF556Q9HAH1 456 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 ABCB9Q9NP78 766 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 SIRT7Q9NRC8 400 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 ZNF391Q9UJN7 358 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 LRP12Q9Y561 859 aa10.21□□□□□ -0.77
CSMD1-205ENST00000519623 TGP01266 2768 aa10.21□□□□□ -0.78
CSMD1-205ENST00000519623 A0A0U1RQV5 110 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 ACOD1A6NK06 481 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 PRR32B1ATL7 298 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 SIGLEC5O15389 551 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 E2F6O75461 281 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 RHBDL1O75783 438 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 ACAA1P09110 424 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-205ENST00000519623 HOXB6P17509 224 aaKnown RBP10.2□□□□□ -0.78
CSMD1-205ENST00000519623 GPM6AP51674 278 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 APOFQ13790 326 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 TAF9Q16594 264 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 DEGS2Q6QHC5 323 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 KCTD8Q6ZWB6 473 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 KRT77Q7Z794 578 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 ZDHHC23Q8IYP9 409 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 CMTM4Q8IZR5 234 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 ZSCAN4Q8NAM6 433 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-205ENST00000519623 PAPD5Q8NDF8 572 aaKnown RBP10.2□□□□□ -0.78
CSMD1-205ENST00000519623 PPP1R14AQ96A00 147 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 SLC25A19Q9HC21 320 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 FAM206AQ9NX38 181 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 DNAJB9Q9UBS3 223 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 DNAJB11Q9UBS4 358 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 LAMP5Q9UJQ1 280 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 FAM96BQ9Y3D0 163 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 RNF114Q9Y508 228 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 CMYA5Q8N3K9 4069 aa10.2□□□□□ -0.78
CSMD1-205ENST00000519623 IGKV1D-17A0A075B6S4 117 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 ZNF816-ZNF321PA0A0X1KG74 233 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 TCRBV3S1A0A5B6 114 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 CCDC182A6NF36 153 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 OR2AT4A6NND4 320 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 ZNF732B4DXR9 585 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 PSMD9O00233 223 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 FKBP6O75344 327 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 CLPXO76031 633 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 IGLV3-1P01715 115 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 PSG2P11465 335 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 MAP2K3P46734 347 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 CAV3P56539 151 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 PROK1P58294 105 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 RPS7P62081 194 aaKnown RBP10.19□□□□□ -0.78
CSMD1-205ENST00000519623 CBX1P83916 185 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 DEFA6Q01524 100 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 KLRD1Q13241 179 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 CEACAM21Q3KPI0 293 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 DMRTC1Q5HYR2 192 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 GDPGP1Q6ZNW5 385 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 Q6ZSV7 163 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 TRPM8Q7Z2W7 1104 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
CSMD1-205ENST00000519623 ITFG2Q969R8 447 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 HIST1H2AAQ96QV6 131 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 TVP23BQ9NYZ1 205 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 ZNRD1Q9P1U0 126 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 NLKQ9UBE8 527 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 SLC25A10Q9UBX3 287 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-205ENST00000519623 ZNF222Q9UK12 451 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 MAB21L2Q9Y586 359 aa10.19□□□□□ -0.78
CSMD1-205ENST00000519623 TMEM269A0A1B0GVZ9 245 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 A0A1W2PRD5 423 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 A0A1W2PRF3 423 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 A0A1W2PRM7 423 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 NKX6-3A6NJ46 265 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 M0R1W7 72 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 NPFFO15130 113 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 FBP1P09467 338 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 GLRA1P23415 457 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 EEF1B2P24534 225 aaKnown RBP10.18□□□□□ -0.78
CSMD1-205ENST00000519623 UBE2E1P51965 193 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 CRISP1P54107 249 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 GNG3P63215 75 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 GUCA2AQ02747 115 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 ROM1Q03395 351 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 FLOT2Q14254 428 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 SNAPC1Q16533 368 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 CEP78Q5JTW2 689 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 HCP5Q6MZN7 132 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 KCTD18Q6PI47 426 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-205ENST00000519623 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 SPATA24Q86W54 205 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 PNKDQ8N490 385 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 ZNRF1Q8ND25 227 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 OR5A2Q8NGI9 324 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 FAM81AQ8TBF8 368 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 AQP3Q92482 292 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 NRBF2Q96F24 287 aa10.18□□□□□ -0.78
CSMD1-205ENST00000519623 DUS3LQ96G46 650 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms