RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 LRCH1Q9Y2L9 728 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 DOCK11Q5JSL3 2073 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 ZAR1LA6NP61 321 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ANKRD30BLA7E2S9 258 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 PRR32B1ATL7 298 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 LGALS8O00214 317 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 FCN3O75636 299 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ATP6V1G2O95670 118 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 FPR2P25090 351 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ACKR3P25106 362 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 CFHR2P36980 270 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 HILS1P60008 231 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 RPS7P62081 194 aaKnown RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 GNB2P62879 340 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 TIGD6Q17RP2 521 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 C1orf146Q5VVC0 180 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 SLX4IPQ5VYV7 408 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 C12orf73Q69YU5 71 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 DEGS2Q6QHC5 323 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 Q6ZNX1 250 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 DCDC5Q6ZRR9 648 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ASRGL1Q7L266 308 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 MEPCEQ7L2J0 689 aaKnown RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 KCTD20Q7Z5Y7 419 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ZDHHC13Q8IUH4 622 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 TCEANCQ8N8B7 351 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ZDHHC22Q8N966 263 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 BOLLQ8N9W6 283 aaKnown RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 OR1M1Q8NGA1 313 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 C22orf15Q8WYQ4 148 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 ADAT1Q9BUB4 502 aaKnown RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 TEX12Q9BXU0 123 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 NIPAL2Q9H841 368 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 RNPEPL1Q9HAU8 725 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 DIABLOQ9NR28 239 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 C14orf119Q9NWQ9 140 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 H2AFY2Q9P0M6 372 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 CTSZQ9UBR2 303 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 NUP50Q9UKX7 468 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 COPS3Q9UNS2 423 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 LRRC42Q9Y546 428 aa7.78□□□□□ -1.16
HDAC3-215ENST00000519474 SOX21Q9Y651 276 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-215ENST00000519474 IGHV2-70DA0A0C4DH43 119 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 ANKRD65E5RJM6 399 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 C3orf80F5H4A9 247 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 M0R129 80 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 MAGEB4O15481 346 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 NOL3O60936 208 aaKnown RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 TMEM127O75204 238 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 PLATP00750 562 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 CST4P01036 141 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 EGR1P18146 543 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 AMY2BP19961 511 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 MAPK3P27361 379 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 DCTDP32321 178 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 PCP4P48539 62 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 PITPNBP48739 271 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 ELF3P78545 371 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 ROM1Q03395 351 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 MZT1Q08AG7 82 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 OR8B8Q15620 311 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 TEX36Q5VZQ5 186 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 KCTD18Q6PI47 426 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 GALNT4Q8N4A0 578 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 CSNK2A3Q8NEV1 391 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 OR8B12Q8NGG6 310 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 OR8B3Q8NGG8 313 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 PIGCQ92535 297 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 SEH1LQ96EE3 360 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 OR8B2Q96RD0 313 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 IL4I1Q96RQ9 567 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 SLC6A7Q99884 636 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 APOL4Q9BPW4 351 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 FGF23Q9GZV9 251 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 SEMA6AQ9H2E6 1030 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 RGCCQ9H4X1 137 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 ESM1Q9NQ30 184 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 KRT84Q9NSB2 600 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 FAM206AQ9NX38 181 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 ERVK-18Q9QC07 812 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.77□□□□□ -1.17
HDAC3-215ENST00000519474 GAB2Q9UQC2 676 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 LRP12Q9Y561 859 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 COL6A5A8TX70 2615 aa7.77□□□□□ -1.17
HDAC3-215ENST00000519474 ATRQ13535 2644 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 IGHV3OR15-7A0A075B7D8 119 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 TRAV38-1A0A0B4J264 116 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 TMEM269A0A1B0GVZ9 245 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 TMEM89A2RUT3 159 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 OOEPA6NGQ2 149 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 A6NLC8 198 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 ZNF850A8MQ14 1090 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-215ENST00000519474 RGS13O14921 159 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 SRSF10O75494 262 aaKnown RBP7.76□□□□□ -1.17
HDAC3-215ENST00000519474 IGLV3-1P01715 115 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 GYPAP02724 150 aa7.76□□□□□ -1.17
HDAC3-215ENST00000519474 MRPL3P09001 348 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms