RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SLC5A7Q9GZV3 580 aa7.4□□□□□ -1.22
CTNNA1-210ENST00000518825 UBE2ZQ9H832 354 aaPredicted RBP7.4□□□□□ -1.22
CTNNA1-210ENST00000518825 RARRES3Q9UL19 164 aa7.4□□□□□ -1.22
CTNNA1-210ENST00000518825 HDGFL3Q9Y3E1 203 aa7.4□□□□□ -1.22
CTNNA1-210ENST00000518825 FIGNL2A6NMB9 653 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 H2AFB1P0C5Y9 115 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 CCL3P10147 92 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 SERPINA2P20848 420 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 ACKR3P25106 362 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 BLVRBP30043 206 aaPredicted RBP7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF84P51523 738 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF133P52736 654 aaPredicted RBP7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 GRB2P62993 217 aaKnown RBP7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 C10orf128Q5T292 105 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 PRSS54Q6PEW0 395 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 TMEM88Q6PEY1 159 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 OR5H2Q8NGV7 314 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 SAP25Q8TEE9 199 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 NARS2Q96I59 477 aaKnown RBP7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 TLNRD1Q9H1K6 362 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 FOXD3Q9UJU5 478 aaPredicted RBP7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 PCDHGA1Q9Y5H4 931 aa7.4□□□□□ -1.23
CTNNA1-210ENST00000518825 IGKV1-27A0A075B6S5 117 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF726A6NNF4 738 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF205O95201 554 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 WDPCPO95876 746 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 AMY2BP19961 511 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 ADH6P28332 368 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 EPHA8P29322 1005 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SLC6A9P48067 706 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 LSM6P62312 80 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 NAAAQ02083 359 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 NKAPLQ5M9Q1 402 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 Q7L0L9 218 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 GTPBP8Q8N3Z3 284 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 CLRN3Q8NCR9 226 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 PIGTQ969N2 578 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 AQP10Q96PS8 301 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 AIFM2Q9BRQ8 373 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 TM2D1Q9BX74 207 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 DEFB126Q9BYW3 111 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 TMEM231Q9H6L2 316 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 PURGQ9UJV8 347 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 NCKAP5O14513 1909 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 A0A0U1RQV5 110 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 NDUFA2O43678 99 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 DHRS3O75911 302 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 PNLIPP16233 465 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 RCC1P18754 421 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 MSR1P21757 451 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 CSNK2A1P68400 391 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 ARFRP1Q13795 201 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF468Q5VIY5 522 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 UQCC3Q6UW78 93 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 CSNK2A3Q8NEV1 391 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SLC22A8Q8TCC7 542 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 PGAM5Q96HS1 289 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 CHST5Q9GZS9 411 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SLC6A15Q9H2J7 730 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 NELFAQ9H3P2 528 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF160Q9HCG1 818 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SH2D2AQ9NP31 389 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 EHFQ9NZC4 300 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 IGHV1-45A0A0A0MS14 117 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 KLF7O75840 302 aaPredicted RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 CSTBP04080 98 aaKnown RBP7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 FCGR2AP12318 317 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 FOSL1P15407 271 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SLC35A1P78382 337 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 OR2A2Q6IF42 318 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 Q6ZPA2 131 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 PPP1R3BQ86XI6 285 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 CBLN2Q8IUK8 224 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SGK3Q96BR1 496 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 IMMP1LQ96LU5 166 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 SRXN1Q9BYN0 137 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 PIGLQ9Y2B2 252 aa7.39□□□□□ -1.23
CTNNA1-210ENST00000518825 KIAA1549Q9HCM3 1950 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 LOC102723996A0A087X1L8 192 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 HOXB5P09067 269 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 TPT1P13693 172 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 RBM39Q14498 530 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 ACTBL2Q562R1 376 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 OR2AE1Q8NHA4 323 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 SLC25A43Q8WUT9 341 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 HAS2Q92819 552 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 PIGQQ9BRB3 760 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 C9JQL5 133 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 MTRF1O75570 445 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 HKR1P10072 659 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 COX6A1P12074 109 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 ZNF708P17019 499 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 EIF1P41567 113 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 RRADP55042 308 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 DAZAP2Q15038 168 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 HFEQ30201 348 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 IGSF11Q5DX21 431 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 CDCP2Q5VXM1 449 aa7.38□□□□□ -1.23
CTNNA1-210ENST00000518825 RPL7L1Q6DKI1 246 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms